Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa1Q8VEE4 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa1Q8VEE4 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpa1Q8VEE4 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rpa1Q8VEE4 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rpa1Q8VEE4 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa1Q8VEE4 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa1Q8VEE4 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa1Q8VEE4 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Rpa1Q8VEE4 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.01□□□□□ -0.17
Rpa1Q8VEE4 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa1Q8VEE4 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa1Q8VEE4 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rpa1Q8VEE4 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa1Q8VEE4 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa1Q8VEE4 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa1Q8VEE4 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa1Q8VEE4 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa1Q8VEE4 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa1Q8VEE4 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa1Q8VEE4 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa1Q8VEE4 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rpa1Q8VEE4 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.01□□□□□ -0.17
Rpa1Q8VEE4 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa1Q8VEE4 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa1Q8VEE4 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa1Q8VEE4 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa1Q8VEE4 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rpa1Q8VEE4 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14□□□□□ -0.17
Rpa1Q8VEE4 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Gm10060-201ENSMUST00000212002 111 ntBASIC14□□□□□ -0.17
Rpa1Q8VEE4 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14□□□□□ -0.17
Rpa1Q8VEE4 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Gm9347-201ENSMUST00000211473 1607 ntBASIC14□□□□□ -0.17
Rpa1Q8VEE4 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Rpa1Q8VEE4 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Gm16198-201ENSMUST00000118766 670 ntBASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Gm27300-201ENSMUST00000184085 97 ntBASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Gm27335-201ENSMUST00000184758 97 ntBASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpa1Q8VEE4 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms