Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Ddx39aQ8VDW0 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx39aQ8VDW0 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx39aQ8VDW0 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx39aQ8VDW0 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.39■□□□□ 0.05
Ddx39aQ8VDW0 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx39aQ8VDW0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx39aQ8VDW0 Gm4984-201ENSMUST00000115987 360 ntBASIC15.39■□□□□ 0.05
Ddx39aQ8VDW0 Gm12485-201ENSMUST00000119641 291 ntBASIC15.39■□□□□ 0.05
Ddx39aQ8VDW0 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx39aQ8VDW0 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC15.39■□□□□ 0.05
Ddx39aQ8VDW0 Gm17150-201ENSMUST00000165577 381 ntBASIC15.39■□□□□ 0.05
Ddx39aQ8VDW0 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ddx39aQ8VDW0 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx39aQ8VDW0 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.39■□□□□ 0.05
Ddx39aQ8VDW0 Gm27892-201ENSMUST00000185017 106 ntBASIC15.39■□□□□ 0.05
Ddx39aQ8VDW0 Gm6266-201ENSMUST00000203844 806 ntBASIC15.39■□□□□ 0.05
Ddx39aQ8VDW0 Gm4971-201ENSMUST00000205991 1108 ntBASIC15.39■□□□□ 0.05
Ddx39aQ8VDW0 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.39■□□□□ 0.05
Ddx39aQ8VDW0 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx39aQ8VDW0 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx39aQ8VDW0 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx39aQ8VDW0 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ddx39aQ8VDW0 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ddx39aQ8VDW0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx39aQ8VDW0 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx39aQ8VDW0 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx39aQ8VDW0 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx39aQ8VDW0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx39aQ8VDW0 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx39aQ8VDW0 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 Gm5303-201ENSMUST00000117943 1252 ntBASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 Gm15429-201ENSMUST00000151268 798 ntBASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 Gm26464-201ENSMUST00000157094 305 ntBASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 Gm27839-201ENSMUST00000184242 106 ntBASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 Gm27772-201ENSMUST00000184900 187 ntBASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 AC161252.3-201ENSMUST00000225465 1549 ntBASIC15.38■□□□□ 0.05
Ddx39aQ8VDW0 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Gm5912-201ENSMUST00000122282 1438 ntBASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Mir698-201ENSMUST00000102164 109 ntBASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Gm14730-201ENSMUST00000122378 1045 ntBASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Gm7498-201ENSMUST00000203282 1084 ntBASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx39aQ8VDW0 Gm21038-201ENSMUST00000222205 1383 ntBASIC15.36■□□□□ 0.05
Ddx39aQ8VDW0 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx39aQ8VDW0 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Ddx39aQ8VDW0 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx39aQ8VDW0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx39aQ8VDW0 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx39aQ8VDW0 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx39aQ8VDW0 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx39aQ8VDW0 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms