Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Gm12091-201ENSMUST00000146791 830 ntBASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Gm6180-201ENSMUST00000065243 498 ntBASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Gm18018-201ENSMUST00000198273 408 ntBASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Gm15823-201ENSMUST00000064305 670 ntBASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ndc1Q8VCB1 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ndc1Q8VCB1 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ndc1Q8VCB1 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ndc1Q8VCB1 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ndc1Q8VCB1 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.1□□□□□ -0.31
Ndc1Q8VCB1 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ndc1Q8VCB1 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ndc1Q8VCB1 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ndc1Q8VCB1 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ndc1Q8VCB1 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ndc1Q8VCB1 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ndc1Q8VCB1 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ndc1Q8VCB1 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ndc1Q8VCB1 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Ndc1Q8VCB1 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.1□□□□□ -0.31
Ndc1Q8VCB1 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.1□□□□□ -0.31
Ndc1Q8VCB1 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.1□□□□□ -0.31
Ndc1Q8VCB1 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ndc1Q8VCB1 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.1□□□□□ -0.31
Ndc1Q8VCB1 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.1□□□□□ -0.31
Ndc1Q8VCB1 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.1□□□□□ -0.31
Ndc1Q8VCB1 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ndc1Q8VCB1 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ndc1Q8VCB1 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ndc1Q8VCB1 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ndc1Q8VCB1 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ndc1Q8VCB1 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ndc1Q8VCB1 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms