Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cnot3Q8K0V4 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cnot3Q8K0V4 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cnot3Q8K0V4 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cnot3Q8K0V4 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cnot3Q8K0V4 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cnot3Q8K0V4 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cnot3Q8K0V4 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cnot3Q8K0V4 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cnot3Q8K0V4 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cnot3Q8K0V4 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cnot3Q8K0V4 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cnot3Q8K0V4 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.03□□□□□ -0.32
Cnot3Q8K0V4 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Cnot3Q8K0V4 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cnot3Q8K0V4 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cnot3Q8K0V4 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cnot3Q8K0V4 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.02□□□□□ -0.32
Cnot3Q8K0V4 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cnot3Q8K0V4 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cnot3Q8K0V4 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cnot3Q8K0V4 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Cnot3Q8K0V4 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cnot3Q8K0V4 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cnot3Q8K0V4 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cnot3Q8K0V4 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cnot3Q8K0V4 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cnot3Q8K0V4 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cnot3Q8K0V4 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cnot3Q8K0V4 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Cnot3Q8K0V4 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cnot3Q8K0V4 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cnot3Q8K0V4 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cnot3Q8K0V4 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.02□□□□□ -0.33
Cnot3Q8K0V4 Gm13597-201ENSMUST00000121239 375 ntBASIC13.02□□□□□ -0.33
Cnot3Q8K0V4 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cnot3Q8K0V4 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.02□□□□□ -0.33
Cnot3Q8K0V4 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cnot3Q8K0V4 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cnot3Q8K0V4 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cnot3Q8K0V4 Gm15590-201ENSMUST00000078419 552 ntBASIC13.02□□□□□ -0.33
Cnot3Q8K0V4 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cnot3Q8K0V4 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cnot3Q8K0V4 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cnot3Q8K0V4 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cnot3Q8K0V4 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cnot3Q8K0V4 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cnot3Q8K0V4 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cnot3Q8K0V4 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cnot3Q8K0V4 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cnot3Q8K0V4 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cnot3Q8K0V4 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.02□□□□□ -0.33
Cnot3Q8K0V4 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cnot3Q8K0V4 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cnot3Q8K0V4 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cnot3Q8K0V4 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cnot3Q8K0V4 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cnot3Q8K0V4 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cnot3Q8K0V4 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Gm24589-201ENSMUST00000116692 94 ntBASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Gm11452-201ENSMUST00000122376 690 ntBASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cnot3Q8K0V4 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms