Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Syne4Q8CII8 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Syne4Q8CII8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Syne4Q8CII8 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Syne4Q8CII8 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Syne4Q8CII8 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Syne4Q8CII8 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Syne4Q8CII8 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Syne4Q8CII8 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Syne4Q8CII8 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Syne4Q8CII8 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.62■□□□□ 0.09
Syne4Q8CII8 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Syne4Q8CII8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Syne4Q8CII8 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Syne4Q8CII8 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Syne4Q8CII8 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Syne4Q8CII8 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Syne4Q8CII8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Syne4Q8CII8 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Syne4Q8CII8 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Syne4Q8CII8 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Syne4Q8CII8 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Syne4Q8CII8 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.61■□□□□ 0.09
Syne4Q8CII8 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
Syne4Q8CII8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Syne4Q8CII8 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.61■□□□□ 0.09
Syne4Q8CII8 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Syne4Q8CII8 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Syne4Q8CII8 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Syne4Q8CII8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Syne4Q8CII8 Mir686-201ENSMUST00000102174 109 ntBASIC15.61■□□□□ 0.09
Syne4Q8CII8 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Syne4Q8CII8 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC15.61■□□□□ 0.09
Syne4Q8CII8 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.61■□□□□ 0.09
Syne4Q8CII8 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Syne4Q8CII8 Gm38144-201ENSMUST00000192790 465 ntBASIC15.61■□□□□ 0.09
Syne4Q8CII8 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC15.61■□□□□ 0.09
Syne4Q8CII8 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.61■□□□□ 0.09
Syne4Q8CII8 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Syne4Q8CII8 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.61■□□□□ 0.09
Syne4Q8CII8 Gm17330-201ENSMUST00000221047 165 ntBASIC15.61■□□□□ 0.09
Syne4Q8CII8 Gm2824-203ENSMUST00000226189 1228 ntBASIC15.61■□□□□ 0.09
Syne4Q8CII8 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC15.61■□□□□ 0.09
Syne4Q8CII8 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Syne4Q8CII8 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Syne4Q8CII8 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Syne4Q8CII8 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.61■□□□□ 0.09
Syne4Q8CII8 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.61■□□□□ 0.09
Syne4Q8CII8 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Syne4Q8CII8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Syne4Q8CII8 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.61■□□□□ 0.09
Syne4Q8CII8 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Syne4Q8CII8 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Syne4Q8CII8 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Syne4Q8CII8 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Syne4Q8CII8 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Syne4Q8CII8 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Syne4Q8CII8 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Syne4Q8CII8 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Syne4Q8CII8 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Syne4Q8CII8 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Syne4Q8CII8 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.6■□□□□ 0.09
Syne4Q8CII8 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.6■□□□□ 0.09
Syne4Q8CII8 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Syne4Q8CII8 Gm11793-201ENSMUST00000120433 981 ntBASIC15.6■□□□□ 0.09
Syne4Q8CII8 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Syne4Q8CII8 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Syne4Q8CII8 Gm16570-201ENSMUST00000161951 436 ntBASIC15.6■□□□□ 0.09
Syne4Q8CII8 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Syne4Q8CII8 Gm38341-201ENSMUST00000195357 515 ntBASIC15.6■□□□□ 0.09
Syne4Q8CII8 Gm37497-201ENSMUST00000195830 798 ntBASIC15.6■□□□□ 0.09
Syne4Q8CII8 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.6■□□□□ 0.09
Syne4Q8CII8 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC15.6■□□□□ 0.09
Syne4Q8CII8 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.6■□□□□ 0.09
Syne4Q8CII8 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.6■□□□□ 0.09
Syne4Q8CII8 AC093022.1-201ENSMUST00000226949 1072 ntBASIC15.6■□□□□ 0.09
Syne4Q8CII8 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Syne4Q8CII8 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Syne4Q8CII8 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Syne4Q8CII8 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Syne4Q8CII8 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Syne4Q8CII8 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Syne4Q8CII8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Syne4Q8CII8 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.6■□□□□ 0.09
Syne4Q8CII8 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Syne4Q8CII8 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syne4Q8CII8 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syne4Q8CII8 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Syne4Q8CII8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syne4Q8CII8 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syne4Q8CII8 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syne4Q8CII8 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syne4Q8CII8 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syne4Q8CII8 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Syne4Q8CII8 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Syne4Q8CII8 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syne4Q8CII8 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syne4Q8CII8 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syne4Q8CII8 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syne4Q8CII8 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms