Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trim52Q8CDV4 Gm10478-201ENSMUST00000084451 396 ntBASIC17.03■□□□□ 0.32
Trim52Q8CDV4 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trim52Q8CDV4 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim52Q8CDV4 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim52Q8CDV4 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim52Q8CDV4 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim52Q8CDV4 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim52Q8CDV4 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim52Q8CDV4 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim52Q8CDV4 Gm26513-201ENSMUST00000181802 2489 ntBASIC17.03■□□□□ 0.32
Trim52Q8CDV4 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim52Q8CDV4 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim52Q8CDV4 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim52Q8CDV4 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
Trim52Q8CDV4 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim52Q8CDV4 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim52Q8CDV4 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.02■□□□□ 0.32
Trim52Q8CDV4 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim52Q8CDV4 Dctn4-202ENSMUST00000223590 1530 ntBASIC17.02■□□□□ 0.32
Trim52Q8CDV4 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim52Q8CDV4 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim52Q8CDV4 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim52Q8CDV4 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim52Q8CDV4 Gm11400-201ENSMUST00000120853 1214 ntBASIC17.02■□□□□ 0.32
Trim52Q8CDV4 Trav4d-2-201ENSMUST00000120914 335 ntBASIC17.02■□□□□ 0.32
Trim52Q8CDV4 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC17.02■□□□□ 0.32
Trim52Q8CDV4 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim52Q8CDV4 Gm42693-201ENSMUST00000196779 631 ntBASIC17.02■□□□□ 0.32
Trim52Q8CDV4 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim52Q8CDV4 Gm3695-201ENSMUST00000087222 1009 ntBASIC17.02■□□□□ 0.32
Trim52Q8CDV4 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trim52Q8CDV4 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim52Q8CDV4 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim52Q8CDV4 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC17.02■□□□□ 0.31
Trim52Q8CDV4 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trim52Q8CDV4 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trim52Q8CDV4 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Trim52Q8CDV4 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim52Q8CDV4 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim52Q8CDV4 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim52Q8CDV4 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim52Q8CDV4 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trim52Q8CDV4 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trim52Q8CDV4 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim52Q8CDV4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim52Q8CDV4 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim52Q8CDV4 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim52Q8CDV4 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trim52Q8CDV4 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim52Q8CDV4 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim52Q8CDV4 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC17.01■□□□□ 0.31
Trim52Q8CDV4 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC17.01■□□□□ 0.31
Trim52Q8CDV4 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim52Q8CDV4 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim52Q8CDV4 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim52Q8CDV4 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trim52Q8CDV4 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim52Q8CDV4 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim52Q8CDV4 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim52Q8CDV4 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC17.01■□□□□ 0.31
Trim52Q8CDV4 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trim52Q8CDV4 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim52Q8CDV4 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17■□□□□ 0.31
Trim52Q8CDV4 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim52Q8CDV4 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC17■□□□□ 0.31
Trim52Q8CDV4 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim52Q8CDV4 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trim52Q8CDV4 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim52Q8CDV4 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC17■□□□□ 0.31
Trim52Q8CDV4 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC17■□□□□ 0.31
Trim52Q8CDV4 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim52Q8CDV4 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC17■□□□□ 0.31
Trim52Q8CDV4 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim52Q8CDV4 Gm17420-201ENSMUST00000164753 153 ntBASIC17■□□□□ 0.31
Trim52Q8CDV4 Gm4271-201ENSMUST00000174444 973 ntBASIC17■□□□□ 0.31
Trim52Q8CDV4 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim52Q8CDV4 Gm45331-201ENSMUST00000209868 554 ntBASIC17■□□□□ 0.31
Trim52Q8CDV4 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim52Q8CDV4 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim52Q8CDV4 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trim52Q8CDV4 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim52Q8CDV4 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim52Q8CDV4 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim52Q8CDV4 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim52Q8CDV4 Gm10040-201ENSMUST00000080726 1662 ntBASIC17■□□□□ 0.31
Trim52Q8CDV4 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim52Q8CDV4 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim52Q8CDV4 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim52Q8CDV4 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim52Q8CDV4 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim52Q8CDV4 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim52Q8CDV4 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC16.99■□□□□ 0.31
Trim52Q8CDV4 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.99■□□□□ 0.31
Trim52Q8CDV4 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Trim52Q8CDV4 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim52Q8CDV4 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Trim52Q8CDV4 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Trim52Q8CDV4 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC16.99■□□□□ 0.31
Trim52Q8CDV4 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms