Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 Gm44719-201ENSMUST00000206404 149 ntBASIC15.31■□□□□ 0.04
Trim9Q8C7M3 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim9Q8C7M3 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim9Q8C7M3 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.29■□□□□ 0.04
Trim9Q8C7M3 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.29■□□□□ 0.04
Trim9Q8C7M3 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.29■□□□□ 0.04
Trim9Q8C7M3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms