Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp44Q8C2S0 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp44Q8C2S0 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp44Q8C2S0 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.22■□□□□ 0.19
Usp44Q8C2S0 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp44Q8C2S0 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.22■□□□□ 0.19
Usp44Q8C2S0 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp44Q8C2S0 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.22■□□□□ 0.19
Usp44Q8C2S0 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.22■□□□□ 0.19
Usp44Q8C2S0 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp44Q8C2S0 Gm5279-201ENSMUST00000199575 745 ntBASIC16.22■□□□□ 0.19
Usp44Q8C2S0 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Usp44Q8C2S0 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.22■□□□□ 0.19
Usp44Q8C2S0 AC161252.3-201ENSMUST00000225465 1549 ntBASIC16.22■□□□□ 0.19
Usp44Q8C2S0 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp44Q8C2S0 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp44Q8C2S0 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.22■□□□□ 0.19
Usp44Q8C2S0 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Usp44Q8C2S0 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp44Q8C2S0 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp44Q8C2S0 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp44Q8C2S0 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC16.22■□□□□ 0.19
Usp44Q8C2S0 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.22■□□□□ 0.19
Usp44Q8C2S0 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp44Q8C2S0 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.22■□□□□ 0.19
Usp44Q8C2S0 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp44Q8C2S0 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp44Q8C2S0 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp44Q8C2S0 Gm14752-201ENSMUST00000120719 2075 ntBASIC16.22■□□□□ 0.19
Usp44Q8C2S0 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Gm7730-201ENSMUST00000212486 454 ntBASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Gm6218-201ENSMUST00000219812 628 ntBASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC16.21■□□□□ 0.19
Usp44Q8C2S0 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp44Q8C2S0 AC139350.1-201ENSMUST00000227064 1594 ntBASIC16.21■□□□□ 0.18
Usp44Q8C2S0 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Usp44Q8C2S0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Gm28760-201ENSMUST00000185995 736 ntBASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Usp44Q8C2S0 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms