Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.12■□□□□ 0.01
Depdc1bQ8BH88 Gm44344-201ENSMUST00000200287 129 ntBASIC15.12■□□□□ 0.01
Depdc1bQ8BH88 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Depdc1bQ8BH88 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Depdc1bQ8BH88 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.12■□□□□ 0.01
Depdc1bQ8BH88 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Depdc1bQ8BH88 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.12■□□□□ 0.01
Depdc1bQ8BH88 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Depdc1bQ8BH88 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.12■□□□□ 0.01
Depdc1bQ8BH88 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Depdc1bQ8BH88 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Depdc1bQ8BH88 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Depdc1bQ8BH88 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Depdc1bQ8BH88 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Depdc1bQ8BH88 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Depdc1bQ8BH88 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Depdc1bQ8BH88 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Depdc1bQ8BH88 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Gm24543-201ENSMUST00000103867 82 ntBASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 AA619741-201ENSMUST00000195095 646 ntBASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Depdc1bQ8BH88 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Depdc1bQ8BH88 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms