Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Prpf40bQ80W14 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Prpf40bQ80W14 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Prpf40bQ80W14 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf40bQ80W14 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf40bQ80W14 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Prpf40bQ80W14 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf40bQ80W14 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf40bQ80W14 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf40bQ80W14 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf40bQ80W14 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf40bQ80W14 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf40bQ80W14 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf40bQ80W14 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf40bQ80W14 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf40bQ80W14 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf40bQ80W14 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.01■□□□□ 0.15
Prpf40bQ80W14 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf40bQ80W14 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf40bQ80W14 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf40bQ80W14 Gm14660-201ENSMUST00000119809 575 ntBASIC16.01■□□□□ 0.15
Prpf40bQ80W14 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf40bQ80W14 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf40bQ80W14 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC16.01■□□□□ 0.15
Prpf40bQ80W14 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Prpf40bQ80W14 Gm27486-201ENSMUST00000184923 80 ntBASIC16.01■□□□□ 0.15
Prpf40bQ80W14 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf40bQ80W14 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC16.01■□□□□ 0.15
Prpf40bQ80W14 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf40bQ80W14 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf40bQ80W14 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf40bQ80W14 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Prpf40bQ80W14 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf40bQ80W14 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Prpf40bQ80W14 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Prpf40bQ80W14 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16■□□□□ 0.15
Prpf40bQ80W14 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16■□□□□ 0.15
Prpf40bQ80W14 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Prpf40bQ80W14 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Prpf40bQ80W14 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Prpf40bQ80W14 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Prpf40bQ80W14 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16■□□□□ 0.15
Prpf40bQ80W14 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Prpf40bQ80W14 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16■□□□□ 0.15
Prpf40bQ80W14 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16■□□□□ 0.15
Prpf40bQ80W14 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Prpf40bQ80W14 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC16■□□□□ 0.15
Prpf40bQ80W14 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC16■□□□□ 0.15
Prpf40bQ80W14 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC16■□□□□ 0.15
Prpf40bQ80W14 Gm13464-201ENSMUST00000119418 935 ntBASIC16■□□□□ 0.15
Prpf40bQ80W14 Gm9726-201ENSMUST00000180321 678 ntBASIC16■□□□□ 0.15
Prpf40bQ80W14 Gm44487-201ENSMUST00000205145 325 ntBASIC16■□□□□ 0.15
Prpf40bQ80W14 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC16■□□□□ 0.15
Prpf40bQ80W14 CT009713.10-202ENSMUST00000225734 696 ntBASIC16■□□□□ 0.15
Prpf40bQ80W14 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Prpf40bQ80W14 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16■□□□□ 0.15
Prpf40bQ80W14 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Prpf40bQ80W14 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Prpf40bQ80W14 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Prpf40bQ80W14 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16■□□□□ 0.15
Prpf40bQ80W14 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Prpf40bQ80W14 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Prpf40bQ80W14 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Prpf40bQ80W14 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Prpf40bQ80W14 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Prpf40bQ80W14 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16■□□□□ 0.15
Prpf40bQ80W14 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16■□□□□ 0.15
Prpf40bQ80W14 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf40bQ80W14 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.99■□□□□ 0.15
Prpf40bQ80W14 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf40bQ80W14 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf40bQ80W14 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf40bQ80W14 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf40bQ80W14 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf40bQ80W14 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Prpf40bQ80W14 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf40bQ80W14 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf40bQ80W14 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf40bQ80W14 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf40bQ80W14 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
Prpf40bQ80W14 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf40bQ80W14 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf40bQ80W14 Gm15460-201ENSMUST00000118147 391 ntBASIC15.99■□□□□ 0.15
Prpf40bQ80W14 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf40bQ80W14 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC15.99■□□□□ 0.15
Prpf40bQ80W14 Gm27731-201ENSMUST00000185192 107 ntBASIC15.99■□□□□ 0.15
Prpf40bQ80W14 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf40bQ80W14 Gm4959-201ENSMUST00000197271 1044 ntBASIC15.99■□□□□ 0.15
Prpf40bQ80W14 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.99■□□□□ 0.15
Prpf40bQ80W14 AC156560.2-201ENSMUST00000221232 264 ntBASIC15.99■□□□□ 0.15
Prpf40bQ80W14 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf40bQ80W14 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf40bQ80W14 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf40bQ80W14 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf40bQ80W14 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.99■□□□□ 0.15
Prpf40bQ80W14 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf40bQ80W14 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf40bQ80W14 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf40bQ80W14 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC15.99■□□□□ 0.15
Prpf40bQ80W14 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms