Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Gm44967-201ENSMUST00000207047 631 ntBASIC11.67□□□□□ -0.54
Rif1Q6PR54 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.67□□□□□ -0.54
Rif1Q6PR54 AC163637.1-201ENSMUST00000215491 1894 ntBASIC11.67□□□□□ -0.54
Rif1Q6PR54 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Rif1Q6PR54 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Gm13369-201ENSMUST00000119442 987 ntBASIC11.67□□□□□ -0.54
Rif1Q6PR54 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.67□□□□□ -0.54
Rif1Q6PR54 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Gm38210-201ENSMUST00000191944 809 ntBASIC11.67□□□□□ -0.54
Rif1Q6PR54 Gm6867-201ENSMUST00000219165 425 ntBASIC11.67□□□□□ -0.54
Rif1Q6PR54 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.67□□□□□ -0.54
Rif1Q6PR54 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rif1Q6PR54 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.66□□□□□ -0.54
Rif1Q6PR54 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Gm23699-201ENSMUST00000158835 135 ntBASIC11.66□□□□□ -0.54
Rif1Q6PR54 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Gm20628-201ENSMUST00000177363 3215 ntBASIC11.66□□□□□ -0.54
Rif1Q6PR54 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rif1Q6PR54 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.66□□□□□ -0.54
Rif1Q6PR54 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rif1Q6PR54 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rif1Q6PR54 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rif1Q6PR54 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Rif1Q6PR54 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rif1Q6PR54 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rif1Q6PR54 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rif1Q6PR54 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rif1Q6PR54 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rif1Q6PR54 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.65□□□□□ -0.54
Rif1Q6PR54 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.65□□□□□ -0.54
Rif1Q6PR54 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Rif1Q6PR54 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.65□□□□□ -0.54
Rif1Q6PR54 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rif1Q6PR54 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.65□□□□□ -0.54
Rif1Q6PR54 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.65□□□□□ -0.54
Rif1Q6PR54 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rif1Q6PR54 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms