Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt42Q6IFX2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt42Q6IFX2 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Krt42Q6IFX2 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Krt42Q6IFX2 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Gm6376-201ENSMUST00000209407 580 ntBASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Gm18669-201ENSMUST00000216049 778 ntBASIC14.24□□□□□ -0.13
Krt42Q6IFX2 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.24□□□□□ -0.13
Krt42Q6IFX2 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.24□□□□□ -0.13
Krt42Q6IFX2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.24□□□□□ -0.13
Krt42Q6IFX2 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt42Q6IFX2 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.23□□□□□ -0.13
Krt42Q6IFX2 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt42Q6IFX2 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Krt42Q6IFX2 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt42Q6IFX2 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt42Q6IFX2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt42Q6IFX2 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt42Q6IFX2 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt42Q6IFX2 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.23□□□□□ -0.13
Krt42Q6IFX2 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Krt42Q6IFX2 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.23□□□□□ -0.13
Krt42Q6IFX2 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Krt42Q6IFX2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Krt42Q6IFX2 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Krt42Q6IFX2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.23□□□□□ -0.13
Krt42Q6IFX2 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.23□□□□□ -0.13
Krt42Q6IFX2 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.23□□□□□ -0.13
Krt42Q6IFX2 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Krt42Q6IFX2 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.23□□□□□ -0.13
Krt42Q6IFX2 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Krt42Q6IFX2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Krt42Q6IFX2 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Krt42Q6IFX2 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt42Q6IFX2 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt42Q6IFX2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt42Q6IFX2 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt42Q6IFX2 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Krt42Q6IFX2 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Krt42Q6IFX2 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Krt42Q6IFX2 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt42Q6IFX2 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt42Q6IFX2 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Krt42Q6IFX2 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Krt42Q6IFX2 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt42Q6IFX2 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt42Q6IFX2 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt42Q6IFX2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt42Q6IFX2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Krt42Q6IFX2 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.22□□□□□ -0.13
Krt42Q6IFX2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt42Q6IFX2 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt42Q6IFX2 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt42Q6IFX2 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt42Q6IFX2 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Krt42Q6IFX2 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.22□□□□□ -0.13
Krt42Q6IFX2 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Krt42Q6IFX2 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt42Q6IFX2 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt42Q6IFX2 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt42Q6IFX2 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Krt42Q6IFX2 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Krt42Q6IFX2 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt42Q6IFX2 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt42Q6IFX2 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt42Q6IFX2 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.21□□□□□ -0.13
Krt42Q6IFX2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt42Q6IFX2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Krt42Q6IFX2 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.21□□□□□ -0.13
Krt42Q6IFX2 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt42Q6IFX2 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt42Q6IFX2 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt42Q6IFX2 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms