Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.44■□□□□ 0.22
Col11a2Q64739 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.44■□□□□ 0.22
Col11a2Q64739 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col11a2Q64739 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col11a2Q64739 Gm10782-202ENSMUST00000223775 1480 ntBASIC16.44■□□□□ 0.22
Col11a2Q64739 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
Col11a2Q64739 Gm4760-201ENSMUST00000119663 1030 ntBASIC16.44■□□□□ 0.22
Col11a2Q64739 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col11a2Q64739 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col11a2Q64739 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
Col11a2Q64739 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col11a2Q64739 Gm22121-201ENSMUST00000175148 54 ntBASIC16.44■□□□□ 0.22
Col11a2Q64739 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC16.44■□□□□ 0.22
Col11a2Q64739 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC16.44■□□□□ 0.22
Col11a2Q64739 CT009718.3-201ENSMUST00000221116 367 ntBASIC16.44■□□□□ 0.22
Col11a2Q64739 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col11a2Q64739 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col11a2Q64739 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col11a2Q64739 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.44■□□□□ 0.22
Col11a2Q64739 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC16.43■□□□□ 0.22
Col11a2Q64739 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col11a2Q64739 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.43■□□□□ 0.22
Col11a2Q64739 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Col11a2Q64739 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col11a2Q64739 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col11a2Q64739 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.43■□□□□ 0.22
Col11a2Q64739 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col11a2Q64739 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC16.43■□□□□ 0.22
Col11a2Q64739 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col11a2Q64739 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col11a2Q64739 Gm11531-201ENSMUST00000117614 555 ntBASIC16.43■□□□□ 0.22
Col11a2Q64739 Gm12201-201ENSMUST00000120657 1234 ntBASIC16.43■□□□□ 0.22
Col11a2Q64739 Gm25043-201ENSMUST00000158604 212 ntBASIC16.43■□□□□ 0.22
Col11a2Q64739 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col11a2Q64739 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.43■□□□□ 0.22
Col11a2Q64739 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC16.43■□□□□ 0.22
Col11a2Q64739 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col11a2Q64739 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col11a2Q64739 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col11a2Q64739 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Col11a2Q64739 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col11a2Q64739 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.43■□□□□ 0.22
Col11a2Q64739 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col11a2Q64739 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col11a2Q64739 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col11a2Q64739 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col11a2Q64739 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col11a2Q64739 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Col11a2Q64739 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC16.42■□□□□ 0.22
Col11a2Q64739 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col11a2Q64739 Gm8885-201ENSMUST00000189382 598 ntBASIC16.42■□□□□ 0.22
Col11a2Q64739 Gm9678-201ENSMUST00000198979 1149 ntBASIC16.42■□□□□ 0.22
Col11a2Q64739 Gm44967-201ENSMUST00000207047 631 ntBASIC16.42■□□□□ 0.22
Col11a2Q64739 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC16.42■□□□□ 0.22
Col11a2Q64739 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC16.42■□□□□ 0.22
Col11a2Q64739 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Col11a2Q64739 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col11a2Q64739 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col11a2Q64739 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col11a2Q64739 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Col11a2Q64739 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col11a2Q64739 Gm7899-201ENSMUST00000192935 1897 ntBASIC16.42■□□□□ 0.22
Col11a2Q64739 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col11a2Q64739 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Col11a2Q64739 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col11a2Q64739 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col11a2Q64739 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col11a2Q64739 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col11a2Q64739 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col11a2Q64739 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col11a2Q64739 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Col11a2Q64739 Mir7032-201ENSMUST00000185154 79 ntBASIC16.42■□□□□ 0.22
Col11a2Q64739 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col11a2Q64739 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col11a2Q64739 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col11a2Q64739 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col11a2Q64739 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col11a2Q64739 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Col11a2Q64739 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col11a2Q64739 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col11a2Q64739 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col11a2Q64739 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col11a2Q64739 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col11a2Q64739 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.41■□□□□ 0.22
Col11a2Q64739 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col11a2Q64739 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col11a2Q64739 Gstp-ps-201ENSMUST00000195526 631 ntBASIC16.41■□□□□ 0.22
Col11a2Q64739 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col11a2Q64739 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Col11a2Q64739 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC16.41■□□□□ 0.22
Col11a2Q64739 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Col11a2Q64739 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col11a2Q64739 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col11a2Q64739 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col11a2Q64739 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.4■□□□□ 0.22
Col11a2Q64739 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col11a2Q64739 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col11a2Q64739 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col11a2Q64739 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col11a2Q64739 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms