Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Zfp248Q640N4 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC10.58□□□□□ -0.72
Zfp248Q640N4 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Zfp248Q640N4 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Zfp248Q640N4 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Zfp248Q640N4 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Zfp248Q640N4 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Zfp248Q640N4 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Zfp248Q640N4 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC10.58□□□□□ -0.72
Zfp248Q640N4 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Zfp248Q640N4 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Zfp248Q640N4 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC10.58□□□□□ -0.72
Zfp248Q640N4 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Zfp248Q640N4 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Gm13365-201ENSMUST00000121188 973 ntBASIC10.57□□□□□ -0.72
Zfp248Q640N4 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC10.57□□□□□ -0.72
Zfp248Q640N4 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Gm45453-201ENSMUST00000211758 853 ntBASIC10.57□□□□□ -0.72
Zfp248Q640N4 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC10.57□□□□□ -0.72
Zfp248Q640N4 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.57□□□□□ -0.72
Zfp248Q640N4 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Zfp248Q640N4 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Zfp248Q640N4 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Zfp248Q640N4 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Zfp248Q640N4 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Zfp248Q640N4 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC10.56□□□□□ -0.72
Zfp248Q640N4 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC10.56□□□□□ -0.72
Zfp248Q640N4 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Zfp248Q640N4 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Zfp248Q640N4 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Zfp248Q640N4 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Zfp248Q640N4 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Zfp248Q640N4 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Zfp248Q640N4 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC10.56□□□□□ -0.72
Zfp248Q640N4 Gm13015-201ENSMUST00000118674 204 ntBASIC10.56□□□□□ -0.72
Zfp248Q640N4 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC10.56□□□□□ -0.72
Zfp248Q640N4 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Zfp248Q640N4 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC10.56□□□□□ -0.72
Zfp248Q640N4 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC10.56□□□□□ -0.72
Zfp248Q640N4 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Zfp248Q640N4 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Zfp248Q640N4 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Zfp248Q640N4 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC10.56□□□□□ -0.72
Zfp248Q640N4 Gm2445-201ENSMUST00000182798 989 ntBASIC10.56□□□□□ -0.72
Zfp248Q640N4 Mir6990-201ENSMUST00000183724 91 ntBASIC10.56□□□□□ -0.72
Zfp248Q640N4 Gm43125-201ENSMUST00000201724 730 ntBASIC10.56□□□□□ -0.72
Zfp248Q640N4 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Zfp248Q640N4 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Zfp248Q640N4 AC225888.1-201ENSMUST00000227184 728 ntBASIC10.56□□□□□ -0.72
Zfp248Q640N4 AC149588.3-201ENSMUST00000227515 150 ntBASIC10.56□□□□□ -0.72
Zfp248Q640N4 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Zfp248Q640N4 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Zfp248Q640N4 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Zfp248Q640N4 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Zfp248Q640N4 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Zfp248Q640N4 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Zfp248Q640N4 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Zfp248Q640N4 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Zfp248Q640N4 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC10.56□□□□□ -0.72
Zfp248Q640N4 Gm37691-201ENSMUST00000192147 2573 ntBASIC10.56□□□□□ -0.72
Zfp248Q640N4 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms