Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VcanQ62059 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VcanQ62059 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
VcanQ62059 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.74□□□□□ -0.37
VcanQ62059 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VcanQ62059 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VcanQ62059 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VcanQ62059 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
VcanQ62059 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VcanQ62059 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
VcanQ62059 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.74□□□□□ -0.37
VcanQ62059 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.74□□□□□ -0.37
VcanQ62059 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VcanQ62059 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
VcanQ62059 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VcanQ62059 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
VcanQ62059 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VcanQ62059 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.74□□□□□ -0.37
VcanQ62059 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VcanQ62059 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VcanQ62059 Gm12816-201ENSMUST00000118069 1212 ntBASIC12.73□□□□□ -0.37
VcanQ62059 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.73□□□□□ -0.37
VcanQ62059 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.73□□□□□ -0.37
VcanQ62059 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VcanQ62059 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.73□□□□□ -0.37
VcanQ62059 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
VcanQ62059 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VcanQ62059 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VcanQ62059 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VcanQ62059 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VcanQ62059 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VcanQ62059 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VcanQ62059 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
VcanQ62059 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VcanQ62059 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VcanQ62059 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VcanQ62059 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VcanQ62059 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.73□□□□□ -0.37
VcanQ62059 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VcanQ62059 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
VcanQ62059 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VcanQ62059 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
VcanQ62059 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.73□□□□□ -0.37
VcanQ62059 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.73□□□□□ -0.37
VcanQ62059 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VcanQ62059 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
VcanQ62059 Gm7666-201ENSMUST00000146631 819 ntBASIC12.73□□□□□ -0.37
VcanQ62059 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.73□□□□□ -0.37
VcanQ62059 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.73□□□□□ -0.37
VcanQ62059 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.73□□□□□ -0.37
VcanQ62059 Gm18027-201ENSMUST00000218947 619 ntBASIC12.73□□□□□ -0.37
VcanQ62059 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
VcanQ62059 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VcanQ62059 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
VcanQ62059 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VcanQ62059 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VcanQ62059 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VcanQ62059 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VcanQ62059 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.72□□□□□ -0.37
VcanQ62059 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.72□□□□□ -0.37
VcanQ62059 Gm7809-201ENSMUST00000153199 742 ntBASIC12.72□□□□□ -0.37
VcanQ62059 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.72□□□□□ -0.37
VcanQ62059 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VcanQ62059 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VcanQ62059 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VcanQ62059 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VcanQ62059 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VcanQ62059 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
VcanQ62059 Gm23218-201ENSMUST00000158124 276 ntBASIC12.72□□□□□ -0.37
VcanQ62059 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VcanQ62059 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VcanQ62059 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VcanQ62059 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VcanQ62059 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.72□□□□□ -0.37
VcanQ62059 Gm12882-201ENSMUST00000121696 517 ntBASIC12.72□□□□□ -0.37
VcanQ62059 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.72□□□□□ -0.37
VcanQ62059 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VcanQ62059 Gm19459-201ENSMUST00000176240 835 ntBASIC12.72□□□□□ -0.37
VcanQ62059 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
VcanQ62059 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VcanQ62059 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VcanQ62059 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
VcanQ62059 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
VcanQ62059 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
VcanQ62059 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VcanQ62059 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
VcanQ62059 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VcanQ62059 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VcanQ62059 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VcanQ62059 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
VcanQ62059 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VcanQ62059 Gm25951-201ENSMUST00000175330 64 ntBASIC12.71□□□□□ -0.37
VcanQ62059 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.71□□□□□ -0.37
VcanQ62059 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VcanQ62059 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.71□□□□□ -0.37
VcanQ62059 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VcanQ62059 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VcanQ62059 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VcanQ62059 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VcanQ62059 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms