Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Foxc1Q61572 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Foxc1Q61572 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Foxc1Q61572 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Foxc1Q61572 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC10.34□□□□□ -0.75
Foxc1Q61572 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Foxc1Q61572 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Foxc1Q61572 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC10.34□□□□□ -0.75
Foxc1Q61572 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Foxc1Q61572 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Foxc1Q61572 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Foxc1Q61572 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Foxc1Q61572 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Foxc1Q61572 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC10.34□□□□□ -0.75
Foxc1Q61572 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Foxc1Q61572 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Foxc1Q61572 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Foxc1Q61572 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Foxc1Q61572 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Foxc1Q61572 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Foxc1Q61572 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Foxc1Q61572 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Foxc1Q61572 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Foxc1Q61572 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC10.34□□□□□ -0.75
Foxc1Q61572 Gm13505-201ENSMUST00000121666 817 ntBASIC10.34□□□□□ -0.75
Foxc1Q61572 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Foxc1Q61572 Cgrrf1-203ENSMUST00000133989 873 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Foxc1Q61572 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC10.34□□□□□ -0.75
Foxc1Q61572 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Foxc1Q61572 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Foxc1Q61572 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC10.34□□□□□ -0.75
Foxc1Q61572 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Foxc1Q61572 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Foxc1Q61572 AC158529.1-201ENSMUST00000223618 239 ntBASIC10.34□□□□□ -0.75
Foxc1Q61572 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC10.34□□□□□ -0.75
Foxc1Q61572 Gm13127-201ENSMUST00000118978 1389 ntBASIC10.34□□□□□ -0.75
Foxc1Q61572 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Foxc1Q61572 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Foxc1Q61572 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Foxc1Q61572 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Foxc1Q61572 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Foxc1Q61572 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Foxc1Q61572 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Foxc1Q61572 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Foxc1Q61572 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Foxc1Q61572 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Foxc1Q61572 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Foxc1Q61572 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Foxc1Q61572 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Foxc1Q61572 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Foxc1Q61572 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC10.33□□□□□ -0.76
Foxc1Q61572 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Foxc1Q61572 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC10.33□□□□□ -0.76
Foxc1Q61572 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Foxc1Q61572 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Foxc1Q61572 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Foxc1Q61572 Gm44607-201ENSMUST00000205611 1090 ntBASIC10.33□□□□□ -0.76
Foxc1Q61572 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC10.33□□□□□ -0.76
Foxc1Q61572 Gm7439-201ENSMUST00000214053 835 ntBASIC10.33□□□□□ -0.76
Foxc1Q61572 AC173345.3-201ENSMUST00000221245 1093 ntBASIC10.33□□□□□ -0.76
Foxc1Q61572 CT025535.1-201ENSMUST00000227172 491 ntBASIC10.33□□□□□ -0.76
Foxc1Q61572 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Gm13517-201ENSMUST00000120782 1495 ntBASIC10.33□□□□□ -0.76
Foxc1Q61572 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Foxc1Q61572 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Foxc1Q61572 Gm43570-201ENSMUST00000199951 3688 ntBASIC10.33□□□□□ -0.76
Foxc1Q61572 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Foxc1Q61572 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Foxc1Q61572 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms