Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 Gm9002-201ENSMUST00000178437 499 ntBASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 Gm25007-201ENSMUST00000083808 133 ntBASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rc3h1Q4VGL6 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Rc3h1Q4VGL6 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rc3h1Q4VGL6 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rc3h1Q4VGL6 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16■□□□□ 0.15
Rc3h1Q4VGL6 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rc3h1Q4VGL6 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Rc3h1Q4VGL6 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rc3h1Q4VGL6 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Rc3h1Q4VGL6 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rc3h1Q4VGL6 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Rc3h1Q4VGL6 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rc3h1Q4VGL6 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rc3h1Q4VGL6 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Rc3h1Q4VGL6 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Rc3h1Q4VGL6 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC16■□□□□ 0.15
Rc3h1Q4VGL6 Gm12416-201ENSMUST00000120911 1008 ntBASIC16■□□□□ 0.15
Rc3h1Q4VGL6 Gm15429-201ENSMUST00000151268 798 ntBASIC16■□□□□ 0.15
Rc3h1Q4VGL6 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rc3h1Q4VGL6 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC16■□□□□ 0.15
Rc3h1Q4VGL6 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rc3h1Q4VGL6 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rc3h1Q4VGL6 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rc3h1Q4VGL6 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rc3h1Q4VGL6 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rc3h1Q4VGL6 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Rc3h1Q4VGL6 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rc3h1Q4VGL6 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 Gm43433-201ENSMUST00000196573 481 ntBASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 Gm8463-201ENSMUST00000208573 613 ntBASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rc3h1Q4VGL6 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rc3h1Q4VGL6 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rc3h1Q4VGL6 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rc3h1Q4VGL6 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rc3h1Q4VGL6 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rc3h1Q4VGL6 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rc3h1Q4VGL6 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rc3h1Q4VGL6 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC15.98■□□□□ 0.15
Rc3h1Q4VGL6 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Rc3h1Q4VGL6 Gm2445-201ENSMUST00000182798 989 ntBASIC15.98■□□□□ 0.15
Rc3h1Q4VGL6 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.98■□□□□ 0.15
Rc3h1Q4VGL6 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rc3h1Q4VGL6 Gm7067-201ENSMUST00000207698 1249 ntBASIC15.98■□□□□ 0.15
Rc3h1Q4VGL6 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rc3h1Q4VGL6 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Rc3h1Q4VGL6 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rc3h1Q4VGL6 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rc3h1Q4VGL6 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms