Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Cks1brtQ3UNC9 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC9.96□□□□□ -0.82
Cks1brtQ3UNC9 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC9.96□□□□□ -0.82
Cks1brtQ3UNC9 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cks1brtQ3UNC9 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cks1brtQ3UNC9 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cks1brtQ3UNC9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC9.96□□□□□ -0.82
Cks1brtQ3UNC9 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cks1brtQ3UNC9 Gm7114-201ENSMUST00000190159 1789 ntBASIC9.96□□□□□ -0.82
Cks1brtQ3UNC9 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC9.96□□□□□ -0.82
Cks1brtQ3UNC9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cks1brtQ3UNC9 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Cks1brtQ3UNC9 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Gm14752-201ENSMUST00000120719 2075 ntBASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 AC164567.1-201ENSMUST00000219185 960 ntBASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1brtQ3UNC9 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Gm27196-201ENSMUST00000184787 2582 ntBASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Gm10728-201ENSMUST00000194292 1829 ntBASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Gm44241-201ENSMUST00000203230 1662 ntBASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Cks1brtQ3UNC9 AC238940.1-201ENSMUST00000225106 1858 ntBASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms