Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Gm3695-201ENSMUST00000087222 1009 ntBASIC17.27■□□□□ 0.35
Col1a2Q01149 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC17.27■□□□□ 0.35
Col1a2Q01149 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col1a2Q01149 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col1a2Q01149 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col1a2Q01149 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.26■□□□□ 0.35
Col1a2Q01149 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col1a2Q01149 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col1a2Q01149 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col1a2Q01149 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col1a2Q01149 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col1a2Q01149 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col1a2Q01149 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col1a2Q01149 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Col1a2Q01149 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col1a2Q01149 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col1a2Q01149 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Col1a2Q01149 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col1a2Q01149 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col1a2Q01149 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Col1a2Q01149 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC17.26■□□□□ 0.35
Col1a2Q01149 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col1a2Q01149 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col1a2Q01149 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Col1a2Q01149 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC17.26■□□□□ 0.35
Col1a2Q01149 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col1a2Q01149 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC17.26■□□□□ 0.35
Col1a2Q01149 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col1a2Q01149 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col1a2Q01149 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col1a2Q01149 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Col1a2Q01149 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col1a2Q01149 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col1a2Q01149 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col1a2Q01149 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col1a2Q01149 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col1a2Q01149 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col1a2Q01149 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col1a2Q01149 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col1a2Q01149 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col1a2Q01149 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col1a2Q01149 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col1a2Q01149 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col1a2Q01149 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col1a2Q01149 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col1a2Q01149 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC17.25■□□□□ 0.35
Col1a2Q01149 Gm29649-201ENSMUST00000185649 419 ntBASIC17.25■□□□□ 0.35
Col1a2Q01149 Gm9124-201ENSMUST00000191789 1092 ntBASIC17.25■□□□□ 0.35
Col1a2Q01149 Gm9113-201ENSMUST00000192510 1018 ntBASIC17.25■□□□□ 0.35
Col1a2Q01149 Gm9131-201ENSMUST00000193557 1089 ntBASIC17.25■□□□□ 0.35
Col1a2Q01149 Gm9121-201ENSMUST00000193749 1071 ntBASIC17.25■□□□□ 0.35
Col1a2Q01149 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col1a2Q01149 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col1a2Q01149 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Col1a2Q01149 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Col1a2Q01149 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col1a2Q01149 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Col1a2Q01149 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col1a2Q01149 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Col1a2Q01149 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Col1a2Q01149 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
Col1a2Q01149 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Col1a2Q01149 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
Col1a2Q01149 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Col1a2Q01149 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col1a2Q01149 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col1a2Q01149 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col1a2Q01149 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col1a2Q01149 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col1a2Q01149 Gm12957-201ENSMUST00000117835 377 ntBASIC17.24■□□□□ 0.35
Col1a2Q01149 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC17.24■□□□□ 0.35
Col1a2Q01149 Gm22331-201ENSMUST00000158066 136 ntBASIC17.24■□□□□ 0.35
Col1a2Q01149 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col1a2Q01149 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC17.24■□□□□ 0.35
Col1a2Q01149 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col1a2Q01149 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Col1a2Q01149 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Col1a2Q01149 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col1a2Q01149 Gm10040-201ENSMUST00000080726 1662 ntBASIC17.24■□□□□ 0.35
Col1a2Q01149 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col1a2Q01149 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col1a2Q01149 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col1a2Q01149 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col1a2Q01149 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col1a2Q01149 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col1a2Q01149 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col1a2Q01149 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.23■□□□□ 0.35
Col1a2Q01149 Gm9200-201ENSMUST00000118513 1354 ntBASIC17.23■□□□□ 0.35
Col1a2Q01149 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col1a2Q01149 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
Col1a2Q01149 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col1a2Q01149 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col1a2Q01149 Gm27731-201ENSMUST00000185192 107 ntBASIC17.23■□□□□ 0.35
Col1a2Q01149 Gm9299-201ENSMUST00000206392 1140 ntBASIC17.23■□□□□ 0.35
Col1a2Q01149 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col1a2Q01149 AC155237.1-201ENSMUST00000226196 1279 ntBASIC17.23■□□□□ 0.35
Col1a2Q01149 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col1a2Q01149 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col1a2Q01149 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col1a2Q01149 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms