Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thumpd3P97770 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thumpd3P97770 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thumpd3P97770 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thumpd3P97770 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thumpd3P97770 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Thumpd3P97770 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Thumpd3P97770 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thumpd3P97770 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thumpd3P97770 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Thumpd3P97770 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Thumpd3P97770 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.15□□□□□ -0.14
Thumpd3P97770 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.15□□□□□ -0.14
Thumpd3P97770 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.15□□□□□ -0.14
Thumpd3P97770 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Thumpd3P97770 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.15□□□□□ -0.14
Thumpd3P97770 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Thumpd3P97770 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.15□□□□□ -0.14
Thumpd3P97770 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 Gm6973-201ENSMUST00000117080 721 ntBASIC14.15□□□□□ -0.14
Thumpd3P97770 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.15□□□□□ -0.14
Thumpd3P97770 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.15□□□□□ -0.14
Thumpd3P97770 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.15□□□□□ -0.14
Thumpd3P97770 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Thumpd3P97770 Gm27430-201ENSMUST00000184585 107 ntBASIC14.15□□□□□ -0.14
Thumpd3P97770 Gm10253-201ENSMUST00000194270 940 ntBASIC14.15□□□□□ -0.14
Thumpd3P97770 Gm44333-201ENSMUST00000197168 107 ntBASIC14.15□□□□□ -0.14
Thumpd3P97770 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.15□□□□□ -0.14
Thumpd3P97770 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.15□□□□□ -0.14
Thumpd3P97770 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.15□□□□□ -0.14
Thumpd3P97770 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd3P97770 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Thumpd3P97770 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Thumpd3P97770 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Thumpd3P97770 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd3P97770 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.14□□□□□ -0.15
Thumpd3P97770 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.14□□□□□ -0.15
Thumpd3P97770 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd3P97770 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd3P97770 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd3P97770 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd3P97770 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.14□□□□□ -0.15
Thumpd3P97770 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd3P97770 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd3P97770 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd3P97770 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd3P97770 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd3P97770 Gm11543-201ENSMUST00000120758 370 ntBASIC14.14□□□□□ -0.15
Thumpd3P97770 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd3P97770 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.14□□□□□ -0.15
Thumpd3P97770 Gm5479-201ENSMUST00000160578 435 ntBASIC14.14□□□□□ -0.15
Thumpd3P97770 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.14□□□□□ -0.15
Thumpd3P97770 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.14□□□□□ -0.15
Thumpd3P97770 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd3P97770 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd3P97770 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.14□□□□□ -0.15
Thumpd3P97770 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd3P97770 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd3P97770 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd3P97770 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd3P97770 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd3P97770 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd3P97770 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.14□□□□□ -0.15
Thumpd3P97770 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.14□□□□□ -0.15
Thumpd3P97770 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.14□□□□□ -0.15
Thumpd3P97770 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thumpd3P97770 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Thumpd3P97770 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thumpd3P97770 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thumpd3P97770 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.13□□□□□ -0.15
Thumpd3P97770 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms