Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tpm1P58771 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpm1P58771 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpm1P58771 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tpm1P58771 Rubie-203ENSMUST00000227803 2430 ntBASIC15.49■□□□□ 0.07
Tpm1P58771 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tpm1P58771 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tpm1P58771 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tpm1P58771 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tpm1P58771 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tpm1P58771 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tpm1P58771 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tpm1P58771 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tpm1P58771 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Tpm1P58771 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Tpm1P58771 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.49■□□□□ 0.07
Tpm1P58771 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.49■□□□□ 0.07
Tpm1P58771 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Tpm1P58771 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Tpm1P58771 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tpm1P58771 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tpm1P58771 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tpm1P58771 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Tpm1P58771 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Tpm1P58771 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tpm1P58771 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tpm1P58771 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tpm1P58771 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tpm1P58771 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tpm1P58771 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tpm1P58771 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tpm1P58771 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tpm1P58771 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tpm1P58771 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Tpm1P58771 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tpm1P58771 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tpm1P58771 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC15.48■□□□□ 0.07
Tpm1P58771 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tpm1P58771 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.48■□□□□ 0.07
Tpm1P58771 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.48■□□□□ 0.07
Tpm1P58771 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tpm1P58771 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.48■□□□□ 0.07
Tpm1P58771 Mir5126-201ENSMUST00000175513 77 ntBASIC15.48■□□□□ 0.07
Tpm1P58771 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Tpm1P58771 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tpm1P58771 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tpm1P58771 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tpm1P58771 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tpm1P58771 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tpm1P58771 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tpm1P58771 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.48■□□□□ 0.07
Tpm1P58771 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tpm1P58771 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tpm1P58771 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tpm1P58771 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tpm1P58771 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tpm1P58771 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tpm1P58771 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tpm1P58771 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Tpm1P58771 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tpm1P58771 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Tpm1P58771 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tpm1P58771 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tpm1P58771 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tpm1P58771 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tpm1P58771 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tpm1P58771 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Tpm1P58771 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tpm1P58771 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tpm1P58771 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tpm1P58771 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Tpm1P58771 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.47■□□□□ 0.07
Tpm1P58771 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.47■□□□□ 0.07
Tpm1P58771 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tpm1P58771 Gm5177-201ENSMUST00000183092 997 ntBASIC15.47■□□□□ 0.07
Tpm1P58771 Gm28659-201ENSMUST00000188013 759 ntBASIC15.47■□□□□ 0.07
Tpm1P58771 Gm5864-201ENSMUST00000202263 970 ntBASIC15.47■□□□□ 0.07
Tpm1P58771 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.47■□□□□ 0.07
Tpm1P58771 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.47■□□□□ 0.07
Tpm1P58771 Gm18195-201ENSMUST00000207604 706 ntBASIC15.47■□□□□ 0.07
Tpm1P58771 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.47■□□□□ 0.07
Tpm1P58771 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.47■□□□□ 0.07
Tpm1P58771 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tpm1P58771 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tpm1P58771 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.47■□□□□ 0.07
Tpm1P58771 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tpm1P58771 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tpm1P58771 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Tpm1P58771 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tpm1P58771 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tpm1P58771 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tpm1P58771 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.47■□□□□ 0.07
Tpm1P58771 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Tpm1P58771 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tpm1P58771 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tpm1P58771 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tpm1P58771 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tpm1P58771 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Tpm1P58771 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tpm1P58771 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms