Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cldn18P56857 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.43□□□□□ -0.42
Cldn18P56857 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.43□□□□□ -0.42
Cldn18P56857 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn18P56857 Gm7730-201ENSMUST00000212486 454 ntBASIC12.43□□□□□ -0.42
Cldn18P56857 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.43□□□□□ -0.42
Cldn18P56857 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.43□□□□□ -0.42
Cldn18P56857 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cldn18P56857 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn18P56857 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn18P56857 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn18P56857 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.43□□□□□ -0.42
Cldn18P56857 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn18P56857 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn18P56857 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn18P56857 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cldn18P56857 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cldn18P56857 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn18P56857 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Cldn18P56857 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldn18P56857 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.43□□□□□ -0.42
Cldn18P56857 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn18P56857 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn18P56857 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Cldn18P56857 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn18P56857 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn18P56857 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn18P56857 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn18P56857 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn18P56857 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn18P56857 Gm24420-201ENSMUST00000176676 59 ntBASIC12.42□□□□□ -0.42
Cldn18P56857 Gm27437-201ENSMUST00000183429 107 ntBASIC12.42□□□□□ -0.42
Cldn18P56857 Mir6977-201ENSMUST00000184960 64 ntBASIC12.42□□□□□ -0.42
Cldn18P56857 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn18P56857 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.42□□□□□ -0.42
Cldn18P56857 Gm44855-201ENSMUST00000205725 362 ntBASIC12.42□□□□□ -0.42
Cldn18P56857 Gm17795-201ENSMUST00000214505 757 ntBASIC12.42□□□□□ -0.42
Cldn18P56857 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn18P56857 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn18P56857 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn18P56857 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cldn18P56857 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cldn18P56857 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn18P56857 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cldn18P56857 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn18P56857 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cldn18P56857 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn18P56857 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldn18P56857 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.41□□□□□ -0.42
Cldn18P56857 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cldn18P56857 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn18P56857 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn18P56857 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn18P56857 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cldn18P56857 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn18P56857 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
Cldn18P56857 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Cldn18P56857 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn18P56857 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cldn18P56857 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn18P56857 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn18P56857 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn18P56857 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn18P56857 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.41□□□□□ -0.42
Cldn18P56857 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn18P56857 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cldn18P56857 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Cldn18P56857 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.41□□□□□ -0.42
Cldn18P56857 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.41□□□□□ -0.42
Cldn18P56857 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.41□□□□□ -0.42
Cldn18P56857 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cldn18P56857 Gm18905-201ENSMUST00000205454 928 ntBASIC12.41□□□□□ -0.42
Cldn18P56857 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cldn18P56857 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.41□□□□□ -0.42
Cldn18P56857 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.41□□□□□ -0.42
Cldn18P56857 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn18P56857 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn18P56857 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.41□□□□□ -0.42
Cldn18P56857 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn18P56857 Gm2423-201ENSMUST00000074863 733 ntBASIC12.41□□□□□ -0.42
Cldn18P56857 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn18P56857 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Cldn18P56857 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn18P56857 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn18P56857 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn18P56857 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn18P56857 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn18P56857 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn18P56857 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn18P56857 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn18P56857 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn18P56857 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn18P56857 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn18P56857 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn18P56857 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn18P56857 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn18P56857 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cldn18P56857 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn18P56857 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.4□□□□□ -0.42
Cldn18P56857 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms