Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Sox3P53784 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox3P53784 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox3P53784 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox3P53784 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sox3P53784 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox3P53784 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sox3P53784 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox3P53784 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox3P53784 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox3P53784 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox3P53784 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox3P53784 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox3P53784 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox3P53784 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox3P53784 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox3P53784 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sox3P53784 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox3P53784 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox3P53784 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.31□□□□□ -0.28
Sox3P53784 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox3P53784 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox3P53784 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox3P53784 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox3P53784 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox3P53784 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox3P53784 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox3P53784 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox3P53784 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox3P53784 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Sox3P53784 Gm13392-201ENSMUST00000117708 150 ntBASIC13.31□□□□□ -0.28
Sox3P53784 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.31□□□□□ -0.28
Sox3P53784 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.31□□□□□ -0.28
Sox3P53784 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.31□□□□□ -0.28
Sox3P53784 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Sox3P53784 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox3P53784 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox3P53784 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.31□□□□□ -0.28
Sox3P53784 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.31□□□□□ -0.28
Sox3P53784 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox3P53784 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.31□□□□□ -0.28
Sox3P53784 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.31□□□□□ -0.28
Sox3P53784 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.31□□□□□ -0.28
Sox3P53784 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.31□□□□□ -0.28
Sox3P53784 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.31□□□□□ -0.28
Sox3P53784 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sox3P53784 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox3P53784 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox3P53784 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.31□□□□□ -0.28
Sox3P53784 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox3P53784 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox3P53784 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox3P53784 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.31□□□□□ -0.28
Sox3P53784 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox3P53784 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox3P53784 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox3P53784 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox3P53784 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox3P53784 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox3P53784 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox3P53784 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox3P53784 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Sox3P53784 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox3P53784 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox3P53784 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox3P53784 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox3P53784 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Sox3P53784 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox3P53784 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox3P53784 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox3P53784 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.3□□□□□ -0.28
Sox3P53784 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.3□□□□□ -0.28
Sox3P53784 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox3P53784 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.3□□□□□ -0.28
Sox3P53784 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.3□□□□□ -0.28
Sox3P53784 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.3□□□□□ -0.28
Sox3P53784 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox3P53784 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Sox3P53784 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.3□□□□□ -0.28
Sox3P53784 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Sox3P53784 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox3P53784 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox3P53784 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox3P53784 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.3□□□□□ -0.28
Sox3P53784 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox3P53784 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox3P53784 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox3P53784 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.3□□□□□ -0.28
Sox3P53784 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox3P53784 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Sox3P53784 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox3P53784 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox3P53784 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox3P53784 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox3P53784 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.29□□□□□ -0.28
Sox3P53784 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.29□□□□□ -0.28
Sox3P53784 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox3P53784 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox3P53784 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sox3P53784 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms