Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Nkx2-1P50220 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Nkx2-1P50220 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx2-1P50220 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx2-1P50220 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.52□□□□□ -0.57
Nkx2-1P50220 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Nkx2-1P50220 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx2-1P50220 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.52□□□□□ -0.57
Nkx2-1P50220 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx2-1P50220 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Nkx2-1P50220 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-1P50220 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-1P50220 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-1P50220 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.51□□□□□ -0.57
Nkx2-1P50220 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-1P50220 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-1P50220 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-1P50220 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-1P50220 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-1P50220 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-1P50220 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.51□□□□□ -0.57
Nkx2-1P50220 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-1P50220 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.51□□□□□ -0.57
Nkx2-1P50220 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-1P50220 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-1P50220 Gm18733-201ENSMUST00000173950 856 ntBASIC11.51□□□□□ -0.57
Nkx2-1P50220 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC11.51□□□□□ -0.57
Nkx2-1P50220 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.51□□□□□ -0.57
Nkx2-1P50220 Gm2651-201ENSMUST00000203560 838 ntBASIC11.51□□□□□ -0.57
Nkx2-1P50220 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.51□□□□□ -0.57
Nkx2-1P50220 Mzt1-203ENSMUST00000227948 952 ntBASIC11.51□□□□□ -0.57
Nkx2-1P50220 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-1P50220 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-1P50220 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Nkx2-1P50220 Gm15590-201ENSMUST00000078419 552 ntBASIC11.51□□□□□ -0.57
Nkx2-1P50220 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-1P50220 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-1P50220 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-1P50220 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.51□□□□□ -0.57
Nkx2-1P50220 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-1P50220 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Nkx2-1P50220 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-1P50220 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-1P50220 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-1P50220 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-1P50220 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-1P50220 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-1P50220 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
Nkx2-1P50220 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.5□□□□□ -0.57
Nkx2-1P50220 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.5□□□□□ -0.57
Nkx2-1P50220 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Gm12350-201ENSMUST00000121208 462 ntBASIC11.5□□□□□ -0.57
Nkx2-1P50220 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.5□□□□□ -0.57
Nkx2-1P50220 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.5□□□□□ -0.57
Nkx2-1P50220 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.5□□□□□ -0.57
Nkx2-1P50220 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-1P50220 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.49□□□□□ -0.57
Nkx2-1P50220 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-1P50220 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms