Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox2P48432 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox2P48432 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox2P48432 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox2P48432 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox2P48432 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Sox2P48432 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox2P48432 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.01□□□□□ -0.33
Sox2P48432 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.01□□□□□ -0.33
Sox2P48432 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sox2P48432 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Sox2P48432 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.01□□□□□ -0.33
Sox2P48432 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.01□□□□□ -0.33
Sox2P48432 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.01□□□□□ -0.33
Sox2P48432 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Sox2P48432 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
Sox2P48432 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox2P48432 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox2P48432 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sox2P48432 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox2P48432 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox2P48432 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.01□□□□□ -0.33
Sox2P48432 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sox2P48432 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox2P48432 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Sox2P48432 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox2P48432 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13□□□□□ -0.33
Sox2P48432 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox2P48432 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox2P48432 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox2P48432 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox2P48432 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13□□□□□ -0.33
Sox2P48432 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13□□□□□ -0.33
Sox2P48432 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13□□□□□ -0.33
Sox2P48432 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox2P48432 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Sox2P48432 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Sox2P48432 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Sox2P48432 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13□□□□□ -0.33
Sox2P48432 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13□□□□□ -0.33
Sox2P48432 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox2P48432 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13□□□□□ -0.33
Sox2P48432 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13□□□□□ -0.33
Sox2P48432 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox2P48432 Gm7229-201ENSMUST00000214719 1007 ntBASIC13□□□□□ -0.33
Sox2P48432 AC154222.1-201ENSMUST00000223882 475 ntBASIC13□□□□□ -0.33
Sox2P48432 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox2P48432 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox2P48432 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox2P48432 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13□□□□□ -0.33
Sox2P48432 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox2P48432 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox2P48432 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox2P48432 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox2P48432 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Sox2P48432 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Sox2P48432 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox2P48432 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox2P48432 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox2P48432 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sox2P48432 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.99□□□□□ -0.33
Sox2P48432 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox2P48432 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox2P48432 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sox2P48432 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox2P48432 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox2P48432 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox2P48432 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox2P48432 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox2P48432 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.99□□□□□ -0.33
Sox2P48432 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.99□□□□□ -0.33
Sox2P48432 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox2P48432 Gm2445-201ENSMUST00000182798 989 ntBASIC12.99□□□□□ -0.33
Sox2P48432 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.99□□□□□ -0.33
Sox2P48432 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.99□□□□□ -0.33
Sox2P48432 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox2P48432 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox2P48432 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox2P48432 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox2P48432 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sox2P48432 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox2P48432 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox2P48432 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Sox2P48432 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.99□□□□□ -0.33
Sox2P48432 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox2P48432 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox2P48432 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox2P48432 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox2P48432 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox2P48432 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sox2P48432 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox2P48432 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox2P48432 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox2P48432 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sox2P48432 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox2P48432 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox2P48432 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.98□□□□□ -0.33
Sox2P48432 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox2P48432 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox2P48432 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms