Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps4bP46467 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.1□□□□□ -0.15
Vps4bP46467 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps4bP46467 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps4bP46467 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.09□□□□□ -0.15
Vps4bP46467 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps4bP46467 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps4bP46467 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps4bP46467 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps4bP46467 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.09□□□□□ -0.15
Vps4bP46467 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps4bP46467 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Vps4bP46467 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps4bP46467 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.09□□□□□ -0.15
Vps4bP46467 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps4bP46467 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.09□□□□□ -0.15
Vps4bP46467 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps4bP46467 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Vps4bP46467 Mir6990-201ENSMUST00000183724 91 ntBASIC14.09□□□□□ -0.15
Vps4bP46467 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Vps4bP46467 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.09□□□□□ -0.15
Vps4bP46467 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps4bP46467 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Vps4bP46467 Mir125a-201ENSMUST00000083545 68 ntBASIC14.09□□□□□ -0.15
Vps4bP46467 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps4bP46467 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vps4bP46467 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps4bP46467 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.09□□□□□ -0.15
Vps4bP46467 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps4bP46467 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.09□□□□□ -0.15
Vps4bP46467 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.09□□□□□ -0.15
Vps4bP46467 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.09□□□□□ -0.15
Vps4bP46467 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps4bP46467 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps4bP46467 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.09□□□□□ -0.15
Vps4bP46467 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps4bP46467 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps4bP46467 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps4bP46467 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps4bP46467 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps4bP46467 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Vps4bP46467 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Vps4bP46467 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Vps4bP46467 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps4bP46467 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps4bP46467 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Vps4bP46467 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Vps4bP46467 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps4bP46467 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.08□□□□□ -0.16
Vps4bP46467 Gm5566-201ENSMUST00000116118 459 ntBASIC14.08□□□□□ -0.16
Vps4bP46467 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.08□□□□□ -0.16
Vps4bP46467 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.08□□□□□ -0.16
Vps4bP46467 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.08□□□□□ -0.16
Vps4bP46467 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps4bP46467 Gm18027-201ENSMUST00000218947 619 ntBASIC14.08□□□□□ -0.16
Vps4bP46467 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.08□□□□□ -0.16
Vps4bP46467 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vps4bP46467 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.08□□□□□ -0.16
Vps4bP46467 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps4bP46467 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps4bP46467 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.08□□□□□ -0.16
Vps4bP46467 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Vps4bP46467 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Vps4bP46467 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps4bP46467 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps4bP46467 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps4bP46467 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps4bP46467 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Vps4bP46467 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps4bP46467 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps4bP46467 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Vps4bP46467 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Vps4bP46467 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps4bP46467 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps4bP46467 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vps4bP46467 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.07□□□□□ -0.16
Vps4bP46467 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.07□□□□□ -0.16
Vps4bP46467 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps4bP46467 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps4bP46467 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vps4bP46467 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps4bP46467 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps4bP46467 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vps4bP46467 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.07□□□□□ -0.16
Vps4bP46467 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vps4bP46467 Gm9719-201ENSMUST00000162765 543 ntBASIC14.07□□□□□ -0.16
Vps4bP46467 Gm43125-201ENSMUST00000201724 730 ntBASIC14.07□□□□□ -0.16
Vps4bP46467 Gm44719-201ENSMUST00000206404 149 ntBASIC14.07□□□□□ -0.16
Vps4bP46467 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps4bP46467 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.07□□□□□ -0.16
Vps4bP46467 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.07□□□□□ -0.16
Vps4bP46467 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps4bP46467 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.07□□□□□ -0.16
Vps4bP46467 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps4bP46467 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.07□□□□□ -0.16
Vps4bP46467 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Vps4bP46467 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps4bP46467 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps4bP46467 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.07□□□□□ -0.16
Vps4bP46467 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms