Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Sdc2P43407 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.09
Sdc2P43407 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sdc2P43407 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sdc2P43407 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sdc2P43407 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sdc2P43407 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sdc2P43407 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sdc2P43407 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sdc2P43407 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sdc2P43407 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Sdc2P43407 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sdc2P43407 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sdc2P43407 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.58■□□□□ 0.08
Sdc2P43407 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.58■□□□□ 0.08
Sdc2P43407 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.58■□□□□ 0.08
Sdc2P43407 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sdc2P43407 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sdc2P43407 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sdc2P43407 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sdc2P43407 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sdc2P43407 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sdc2P43407 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Sdc2P43407 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sdc2P43407 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sdc2P43407 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sdc2P43407 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sdc2P43407 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sdc2P43407 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sdc2P43407 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.57■□□□□ 0.08
Sdc2P43407 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sdc2P43407 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sdc2P43407 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Sdc2P43407 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Sdc2P43407 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sdc2P43407 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Sdc2P43407 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sdc2P43407 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Sdc2P43407 Gm5566-201ENSMUST00000116118 459 ntBASIC15.57■□□□□ 0.08
Sdc2P43407 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sdc2P43407 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.57■□□□□ 0.08
Sdc2P43407 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.57■□□□□ 0.08
Sdc2P43407 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.57■□□□□ 0.08
Sdc2P43407 Gm29541-201ENSMUST00000191351 678 ntBASIC15.57■□□□□ 0.08
Sdc2P43407 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.57■□□□□ 0.08
Sdc2P43407 Gm44335-201ENSMUST00000196879 141 ntBASIC15.57■□□□□ 0.08
Sdc2P43407 Gm44297-201ENSMUST00000198304 141 ntBASIC15.57■□□□□ 0.08
Sdc2P43407 Gm44346-201ENSMUST00000198851 141 ntBASIC15.57■□□□□ 0.08
Sdc2P43407 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.57■□□□□ 0.08
Sdc2P43407 Gm18027-201ENSMUST00000218947 619 ntBASIC15.57■□□□□ 0.08
Sdc2P43407 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sdc2P43407 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sdc2P43407 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Sdc2P43407 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sdc2P43407 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sdc2P43407 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sdc2P43407 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sdc2P43407 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Sdc2P43407 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sdc2P43407 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.57■□□□□ 0.08
Sdc2P43407 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sdc2P43407 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sdc2P43407 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sdc2P43407 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Sdc2P43407 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Sdc2P43407 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Sdc2P43407 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.56■□□□□ 0.08
Sdc2P43407 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sdc2P43407 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sdc2P43407 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Sdc2P43407 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sdc2P43407 Gm11594-201ENSMUST00000122313 162 ntBASIC15.56■□□□□ 0.08
Sdc2P43407 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sdc2P43407 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.56■□□□□ 0.08
Sdc2P43407 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Sdc2P43407 Gm9719-201ENSMUST00000162765 543 ntBASIC15.56■□□□□ 0.08
Sdc2P43407 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.56■□□□□ 0.08
Sdc2P43407 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sdc2P43407 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.56■□□□□ 0.08
Sdc2P43407 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sdc2P43407 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC15.56■□□□□ 0.08
Sdc2P43407 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Sdc2P43407 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.56■□□□□ 0.08
Sdc2P43407 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.56■□□□□ 0.08
Sdc2P43407 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.56■□□□□ 0.08
Sdc2P43407 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sdc2P43407 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sdc2P43407 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sdc2P43407 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sdc2P43407 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.55■□□□□ 0.08
Sdc2P43407 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sdc2P43407 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sdc2P43407 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sdc2P43407 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.55■□□□□ 0.08
Sdc2P43407 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sdc2P43407 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.55■□□□□ 0.08
Sdc2P43407 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sdc2P43407 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sdc2P43407 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.55■□□□□ 0.08
Sdc2P43407 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms