Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HttP42859 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.43□□□□□ -0.1
HttP42859 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HttP42859 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.43□□□□□ -0.1
HttP42859 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HttP42859 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HttP42859 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HttP42859 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HttP42859 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HttP42859 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HttP42859 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.42□□□□□ -0.1
HttP42859 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HttP42859 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HttP42859 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HttP42859 Gm5070-201ENSMUST00000177599 862 ntBASIC14.42□□□□□ -0.1
HttP42859 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HttP42859 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.42□□□□□ -0.1
HttP42859 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.42□□□□□ -0.1
HttP42859 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.42□□□□□ -0.1
HttP42859 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HttP42859 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HttP42859 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.42□□□□□ -0.1
HttP42859 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HttP42859 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HttP42859 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HttP42859 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HttP42859 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HttP42859 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HttP42859 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HttP42859 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.42□□□□□ -0.1
HttP42859 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.42□□□□□ -0.1
HttP42859 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
HttP42859 Gm37666-201ENSMUST00000194110 866 ntBASIC14.42□□□□□ -0.1
HttP42859 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.42□□□□□ -0.1
HttP42859 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.42□□□□□ -0.1
HttP42859 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
HttP42859 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HttP42859 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.42□□□□□ -0.1
HttP42859 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HttP42859 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.42□□□□□ -0.1
HttP42859 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
HttP42859 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HttP42859 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HttP42859 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HttP42859 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC14.41□□□□□ -0.1
HttP42859 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
HttP42859 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC14.41□□□□□ -0.1
HttP42859 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HttP42859 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HttP42859 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HttP42859 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HttP42859 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HttP42859 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HttP42859 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HttP42859 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.41□□□□□ -0.1
HttP42859 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.41□□□□□ -0.1
HttP42859 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HttP42859 Gm16202-201ENSMUST00000117532 544 ntBASIC14.41□□□□□ -0.1
HttP42859 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC14.41□□□□□ -0.1
HttP42859 Gm18734-201ENSMUST00000172937 808 ntBASIC14.41□□□□□ -0.1
HttP42859 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.41□□□□□ -0.1
HttP42859 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HttP42859 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC14.41□□□□□ -0.1
HttP42859 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.41□□□□□ -0.1
HttP42859 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HttP42859 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HttP42859 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HttP42859 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HttP42859 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
HttP42859 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HttP42859 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HttP42859 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HttP42859 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HttP42859 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HttP42859 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HttP42859 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HttP42859 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.41□□□□□ -0.1
HttP42859 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HttP42859 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HttP42859 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
HttP42859 Gm15770-201ENSMUST00000117498 584 ntBASIC14.41□□□□□ -0.1
HttP42859 Gm15131-201ENSMUST00000119124 595 ntBASIC14.41□□□□□ -0.1
HttP42859 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HttP42859 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HttP42859 Gm28693-202ENSMUST00000190758 331 ntBASIC14.41□□□□□ -0.1
HttP42859 Gm43916-201ENSMUST00000205062 967 ntBASIC14.41□□□□□ -0.1
HttP42859 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HttP42859 Gm7848-201ENSMUST00000210739 718 ntBASIC14.41□□□□□ -0.1
HttP42859 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HttP42859 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HttP42859 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HttP42859 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HttP42859 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC14.4□□□□□ -0.1
HttP42859 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HttP42859 Gm14109-201ENSMUST00000118814 309 ntBASIC14.4□□□□□ -0.1
HttP42859 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HttP42859 Rmrp-201ENSMUST00000157463 271 ntBASIC14.4□□□□□ -0.1
HttP42859 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HttP42859 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.4□□□□□ -0.1
HttP42859 Ntng1-201ENSMUST00000051253 327 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms