Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cxcl12P40224 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.19□□□□□ -0.14
Cxcl12P40224 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cxcl12P40224 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cxcl12P40224 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.19□□□□□ -0.14
Cxcl12P40224 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Mospd4-201ENSMUST00000180618 576 ntBASIC14.19□□□□□ -0.14
Cxcl12P40224 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.19□□□□□ -0.14
Cxcl12P40224 Gm38158-201ENSMUST00000194617 339 ntBASIC14.19□□□□□ -0.14
Cxcl12P40224 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.19□□□□□ -0.14
Cxcl12P40224 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Gm21769-201ENSMUST00000211922 111 ntBASIC14.19□□□□□ -0.14
Cxcl12P40224 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.19□□□□□ -0.14
Cxcl12P40224 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.19□□□□□ -0.14
Cxcl12P40224 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.19□□□□□ -0.14
Cxcl12P40224 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.19□□□□□ -0.14
Cxcl12P40224 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Cxcl12P40224 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.19□□□□□ -0.14
Cxcl12P40224 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Cxcl12P40224 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl12P40224 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cxcl12P40224 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl12P40224 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl12P40224 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cxcl12P40224 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl12P40224 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl12P40224 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl12P40224 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl12P40224 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.18□□□□□ -0.14
Cxcl12P40224 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cxcl12P40224 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14.18□□□□□ -0.14
Cxcl12P40224 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl12P40224 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl12P40224 Gm6222-202ENSMUST00000182143 629 ntBASIC14.18□□□□□ -0.14
Cxcl12P40224 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Cxcl12P40224 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl12P40224 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl12P40224 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl12P40224 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl12P40224 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl12P40224 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl12P40224 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl12P40224 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl12P40224 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl12P40224 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl12P40224 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.18□□□□□ -0.14
Cxcl12P40224 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl12P40224 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cxcl12P40224 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl12P40224 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl12P40224 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
Cxcl12P40224 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.17□□□□□ -0.14
Cxcl12P40224 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.17□□□□□ -0.14
Cxcl12P40224 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl12P40224 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl12P40224 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl12P40224 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cxcl12P40224 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Cxcl12P40224 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
Cxcl12P40224 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl12P40224 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl12P40224 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cxcl12P40224 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.17□□□□□ -0.14
Cxcl12P40224 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl12P40224 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl12P40224 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms