Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Slc6a1P31648 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Slc6a1P31648 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Slc6a1P31648 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.96□□□□□ -0.5
Slc6a1P31648 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Slc6a1P31648 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc6a1P31648 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc6a1P31648 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc6a1P31648 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc6a1P31648 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc6a1P31648 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc6a1P31648 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.95□□□□□ -0.5
Slc6a1P31648 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc6a1P31648 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc6a1P31648 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Slc6a1P31648 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Slc6a1P31648 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc6a1P31648 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Slc6a1P31648 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Slc6a1P31648 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc6a1P31648 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc6a1P31648 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Slc6a1P31648 Gm11779-201ENSMUST00000118541 368 ntBASIC11.95□□□□□ -0.5
Slc6a1P31648 Gm12260-201ENSMUST00000122447 411 ntBASIC11.95□□□□□ -0.5
Slc6a1P31648 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Slc6a1P31648 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Slc6a1P31648 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Slc6a1P31648 Olfr286-202ENSMUST00000205305 969 ntBASIC11.95□□□□□ -0.5
Slc6a1P31648 AC159106.1-201ENSMUST00000224421 690 ntBASIC11.95□□□□□ -0.5
Slc6a1P31648 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.95□□□□□ -0.5
Slc6a1P31648 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc6a1P31648 Gm5867-201ENSMUST00000063197 592 ntBASIC11.95□□□□□ -0.5
Slc6a1P31648 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc6a1P31648 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc6a1P31648 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.95□□□□□ -0.5
Slc6a1P31648 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Slc6a1P31648 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc6a1P31648 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc6a1P31648 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc6a1P31648 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Slc6a1P31648 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc6a1P31648 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Slc6a1P31648 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Slc6a1P31648 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc6a1P31648 Pck2-205ENSMUST00000226352 2784 ntBASIC11.95□□□□□ -0.5
Slc6a1P31648 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc6a1P31648 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Slc6a1P31648 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Slc6a1P31648 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.94□□□□□ -0.5
Slc6a1P31648 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc6a1P31648 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc6a1P31648 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc6a1P31648 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc6a1P31648 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Slc6a1P31648 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc6a1P31648 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Slc6a1P31648 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc6a1P31648 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.94□□□□□ -0.5
Slc6a1P31648 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Slc6a1P31648 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC11.94□□□□□ -0.5
Slc6a1P31648 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Slc6a1P31648 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.94□□□□□ -0.5
Slc6a1P31648 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Slc6a1P31648 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc6a1P31648 AC131709.1-201ENSMUST00000224731 1180 ntBASIC11.94□□□□□ -0.5
Slc6a1P31648 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc6a1P31648 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Slc6a1P31648 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Slc6a1P31648 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc6a1P31648 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc6a1P31648 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc6a1P31648 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc6a1P31648 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc6a1P31648 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc6a1P31648 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc6a1P31648 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc6a1P31648 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc6a1P31648 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.94□□□□□ -0.5
Slc6a1P31648 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc6a1P31648 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc6a1P31648 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Slc6a1P31648 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.93□□□□□ -0.5
Slc6a1P31648 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Slc6a1P31648 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc6a1P31648 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Slc6a1P31648 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Slc6a1P31648 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Slc6a1P31648 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc6a1P31648 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc6a1P31648 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc6a1P31648 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Slc6a1P31648 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc6a1P31648 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc6a1P31648 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Slc6a1P31648 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc6a1P31648 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Slc6a1P31648 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc6a1P31648 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.93□□□□□ -0.5
Slc6a1P31648 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc6a1P31648 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms