Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.02□□□□□ -0.33
IghmP01872 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IghmP01872 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IghmP01872 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IghmP01872 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
IghmP01872 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
IghmP01872 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IghmP01872 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.01□□□□□ -0.33
IghmP01872 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
IghmP01872 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
IghmP01872 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IghmP01872 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
IghmP01872 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IghmP01872 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IghmP01872 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IghmP01872 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
IghmP01872 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
IghmP01872 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
IghmP01872 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IghmP01872 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
IghmP01872 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.01□□□□□ -0.33
IghmP01872 Gm27397-201ENSMUST00000184997 107 ntBASIC13.01□□□□□ -0.33
IghmP01872 Gm33320-201ENSMUST00000192232 530 ntBASIC13.01□□□□□ -0.33
IghmP01872 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
IghmP01872 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
IghmP01872 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IghmP01872 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.01□□□□□ -0.33
IghmP01872 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.01□□□□□ -0.33
IghmP01872 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IghmP01872 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IghmP01872 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
IghmP01872 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IghmP01872 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
IghmP01872 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
IghmP01872 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.01□□□□□ -0.33
IghmP01872 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
IghmP01872 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IghmP01872 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13□□□□□ -0.33
IghmP01872 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IghmP01872 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IghmP01872 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13□□□□□ -0.33
IghmP01872 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
IghmP01872 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IghmP01872 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
IghmP01872 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13□□□□□ -0.33
IghmP01872 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13□□□□□ -0.33
IghmP01872 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
IghmP01872 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13□□□□□ -0.33
IghmP01872 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13□□□□□ -0.33
IghmP01872 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
IghmP01872 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13□□□□□ -0.33
IghmP01872 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13□□□□□ -0.33
IghmP01872 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13□□□□□ -0.33
IghmP01872 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IghmP01872 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
IghmP01872 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
IghmP01872 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IghmP01872 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IghmP01872 Mir698-201ENSMUST00000102164 109 ntBASIC13□□□□□ -0.33
IghmP01872 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13□□□□□ -0.33
IghmP01872 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IghmP01872 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IghmP01872 Gm6415-201ENSMUST00000118488 348 ntBASIC13□□□□□ -0.33
IghmP01872 Gm15653-201ENSMUST00000119247 907 ntBASIC13□□□□□ -0.33
IghmP01872 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13□□□□□ -0.33
IghmP01872 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
IghmP01872 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
IghmP01872 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IghmP01872 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IghmP01872 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
IghmP01872 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13□□□□□ -0.33
IghmP01872 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IghmP01872 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
IghmP01872 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
IghmP01872 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IghmP01872 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
IghmP01872 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IghmP01872 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IghmP01872 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
IghmP01872 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IghmP01872 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
IghmP01872 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
IghmP01872 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
IghmP01872 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
IghmP01872 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
IghmP01872 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IghmP01872 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IghmP01872 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
IghmP01872 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.99□□□□□ -0.33
IghmP01872 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.99□□□□□ -0.33
IghmP01872 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IghmP01872 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IghmP01872 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IghmP01872 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IghmP01872 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
IghmP01872 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
IghmP01872 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
IghmP01872 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IghmP01872 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
IghmP01872 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms