Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.59□□□□□ -0.39
Lmx1bO88609 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.59□□□□□ -0.39
Lmx1bO88609 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.59□□□□□ -0.39
Lmx1bO88609 Gm28631-201ENSMUST00000190740 334 ntBASIC12.59□□□□□ -0.39
Lmx1bO88609 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.59□□□□□ -0.39
Lmx1bO88609 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.59□□□□□ -0.39
Lmx1bO88609 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Lmx1bO88609 Gm9908-201ENSMUST00000211534 448 ntBASIC12.59□□□□□ -0.39
Lmx1bO88609 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.59□□□□□ -0.39
Lmx1bO88609 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.59□□□□□ -0.39
Lmx1bO88609 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Lmx1bO88609 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Lmx1bO88609 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lmx1bO88609 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lmx1bO88609 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lmx1bO88609 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Lmx1bO88609 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lmx1bO88609 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lmx1bO88609 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.58□□□□□ -0.4
Lmx1bO88609 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lmx1bO88609 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Lmx1bO88609 Gm8515-201ENSMUST00000194852 576 ntBASIC12.58□□□□□ -0.4
Lmx1bO88609 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.58□□□□□ -0.4
Lmx1bO88609 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Lmx1bO88609 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmx1bO88609 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.58□□□□□ -0.4
Lmx1bO88609 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmx1bO88609 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmx1bO88609 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmx1bO88609 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmx1bO88609 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmx1bO88609 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmx1bO88609 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmx1bO88609 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Lmx1bO88609 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Lmx1bO88609 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lmx1bO88609 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lmx1bO88609 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Lmx1bO88609 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Lmx1bO88609 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmx1bO88609 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmx1bO88609 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.58□□□□□ -0.4
Lmx1bO88609 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lmx1bO88609 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmx1bO88609 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmx1bO88609 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmx1bO88609 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmx1bO88609 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Lmx1bO88609 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lmx1bO88609 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lmx1bO88609 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lmx1bO88609 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lmx1bO88609 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Lmx1bO88609 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lmx1bO88609 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lmx1bO88609 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lmx1bO88609 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lmx1bO88609 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Lmx1bO88609 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lmx1bO88609 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lmx1bO88609 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.57□□□□□ -0.4
Lmx1bO88609 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lmx1bO88609 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lmx1bO88609 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Lmx1bO88609 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.57□□□□□ -0.4
Lmx1bO88609 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.57□□□□□ -0.4
Lmx1bO88609 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.57□□□□□ -0.4
Lmx1bO88609 Gm18018-201ENSMUST00000198273 408 ntBASIC12.57□□□□□ -0.4
Lmx1bO88609 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.57□□□□□ -0.4
Lmx1bO88609 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.57□□□□□ -0.4
Lmx1bO88609 Gm45668-201ENSMUST00000211271 493 ntBASIC12.57□□□□□ -0.4
Lmx1bO88609 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lmx1bO88609 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.57□□□□□ -0.4
Lmx1bO88609 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.57□□□□□ -0.4
Lmx1bO88609 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms