Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.22■□□□□ 0.03
Trdmt1O55055 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC15.22■□□□□ 0.03
Trdmt1O55055 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trdmt1O55055 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.22■□□□□ 0.03
Trdmt1O55055 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trdmt1O55055 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC15.22■□□□□ 0.03
Trdmt1O55055 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.22■□□□□ 0.03
Trdmt1O55055 CU024892.2-201ENSMUST00000224608 832 ntBASIC15.22■□□□□ 0.03
Trdmt1O55055 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trdmt1O55055 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trdmt1O55055 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trdmt1O55055 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trdmt1O55055 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Trdmt1O55055 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trdmt1O55055 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trdmt1O55055 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.22■□□□□ 0.03
Trdmt1O55055 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trdmt1O55055 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trdmt1O55055 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trdmt1O55055 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trdmt1O55055 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trdmt1O55055 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trdmt1O55055 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trdmt1O55055 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trdmt1O55055 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Trdmt1O55055 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trdmt1O55055 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trdmt1O55055 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trdmt1O55055 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trdmt1O55055 Gm15770-201ENSMUST00000117498 584 ntBASIC15.21■□□□□ 0.03
Trdmt1O55055 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trdmt1O55055 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC15.21■□□□□ 0.03
Trdmt1O55055 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.21■□□□□ 0.03
Trdmt1O55055 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC15.21■□□□□ 0.03
Trdmt1O55055 AC154171.1-201ENSMUST00000224610 643 ntBASIC15.21■□□□□ 0.03
Trdmt1O55055 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trdmt1O55055 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trdmt1O55055 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trdmt1O55055 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trdmt1O55055 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.21■□□□□ 0.03
Trdmt1O55055 Gm26315-201ENSMUST00000083890 321 ntBASIC15.21■□□□□ 0.03
Trdmt1O55055 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trdmt1O55055 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trdmt1O55055 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trdmt1O55055 Gm12846-201ENSMUST00000120431 1373 ntBASIC15.21■□□□□ 0.02
Trdmt1O55055 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.21■□□□□ 0.02
Trdmt1O55055 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.21■□□□□ 0.02
Trdmt1O55055 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trdmt1O55055 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trdmt1O55055 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trdmt1O55055 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trdmt1O55055 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.2■□□□□ 0.02
Trdmt1O55055 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.2■□□□□ 0.02
Trdmt1O55055 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trdmt1O55055 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trdmt1O55055 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trdmt1O55055 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trdmt1O55055 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.2■□□□□ 0.02
Trdmt1O55055 Gm4271-201ENSMUST00000174444 973 ntBASIC15.2■□□□□ 0.02
Trdmt1O55055 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trdmt1O55055 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.2■□□□□ 0.02
Trdmt1O55055 Gm6013-201ENSMUST00000212264 699 ntBASIC15.2■□□□□ 0.02
Trdmt1O55055 Gm19309-201ENSMUST00000218295 205 ntBASIC15.2■□□□□ 0.02
Trdmt1O55055 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trdmt1O55055 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trdmt1O55055 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trdmt1O55055 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC15.2■□□□□ 0.02
Trdmt1O55055 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trdmt1O55055 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Trdmt1O55055 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trdmt1O55055 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trdmt1O55055 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.2■□□□□ 0.02
Trdmt1O55055 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trdmt1O55055 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15.19■□□□□ 0.02
Trdmt1O55055 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trdmt1O55055 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trdmt1O55055 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trdmt1O55055 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trdmt1O55055 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trdmt1O55055 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trdmt1O55055 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trdmt1O55055 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trdmt1O55055 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.19■□□□□ 0.02
Trdmt1O55055 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.19■□□□□ 0.02
Trdmt1O55055 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.19■□□□□ 0.02
Trdmt1O55055 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.19■□□□□ 0.02
Trdmt1O55055 Gm12403-201ENSMUST00000121384 959 ntBASIC15.19■□□□□ 0.02
Trdmt1O55055 Gm1335-201ENSMUST00000121653 386 ntBASIC15.19■□□□□ 0.02
Trdmt1O55055 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC15.19■□□□□ 0.02
Trdmt1O55055 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.19■□□□□ 0.02
Trdmt1O55055 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.19■□□□□ 0.02
Trdmt1O55055 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC15.19■□□□□ 0.02
Trdmt1O55055 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.19■□□□□ 0.02
Trdmt1O55055 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.19■□□□□ 0.02
Trdmt1O55055 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.19■□□□□ 0.02
Trdmt1O55055 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.19■□□□□ 0.02
Trdmt1O55055 Gm2445-201ENSMUST00000182798 989 ntBASIC15.19■□□□□ 0.02
Trdmt1O55055 Gm27682-201ENSMUST00000183930 110 ntBASIC15.19■□□□□ 0.02
Trdmt1O55055 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trdmt1O55055 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms