Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Atf6F6VAN0 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Atf6F6VAN0 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Atf6F6VAN0 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Atf6F6VAN0 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Atf6F6VAN0 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atf6F6VAN0 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Atf6F6VAN0 Gm2445-201ENSMUST00000182798 989 ntBASIC14.28□□□□□ -0.12
Atf6F6VAN0 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.28□□□□□ -0.12
Atf6F6VAN0 Gm33320-201ENSMUST00000192232 530 ntBASIC14.28□□□□□ -0.12
Atf6F6VAN0 Gm46209-201ENSMUST00000217912 553 ntBASIC14.28□□□□□ -0.12
Atf6F6VAN0 Matn2-206ENSMUST00000228570 2798 ntBASIC14.28□□□□□ -0.12
Atf6F6VAN0 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Atf6F6VAN0 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atf6F6VAN0 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atf6F6VAN0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atf6F6VAN0 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Atf6F6VAN0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atf6F6VAN0 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Atf6F6VAN0 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Atf6F6VAN0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Atf6F6VAN0 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atf6F6VAN0 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Atf6F6VAN0 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Atf6F6VAN0 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atf6F6VAN0 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.28□□□□□ -0.12
Atf6F6VAN0 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.28□□□□□ -0.12
Atf6F6VAN0 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atf6F6VAN0 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Atf6F6VAN0 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.27□□□□□ -0.12
Atf6F6VAN0 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.27□□□□□ -0.12
Atf6F6VAN0 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atf6F6VAN0 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atf6F6VAN0 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Atf6F6VAN0 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atf6F6VAN0 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Atf6F6VAN0 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atf6F6VAN0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atf6F6VAN0 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atf6F6VAN0 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Atf6F6VAN0 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Atf6F6VAN0 Gm15653-201ENSMUST00000119247 907 ntBASIC14.27□□□□□ -0.13
Atf6F6VAN0 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.27□□□□□ -0.13
Atf6F6VAN0 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atf6F6VAN0 Gm27618-201ENSMUST00000183671 60 ntBASIC14.27□□□□□ -0.13
Atf6F6VAN0 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Atf6F6VAN0 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.27□□□□□ -0.13
Atf6F6VAN0 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.27□□□□□ -0.13
Atf6F6VAN0 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atf6F6VAN0 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.27□□□□□ -0.13
Atf6F6VAN0 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.27□□□□□ -0.13
Atf6F6VAN0 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atf6F6VAN0 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Atf6F6VAN0 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atf6F6VAN0 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Atf6F6VAN0 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atf6F6VAN0 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atf6F6VAN0 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atf6F6VAN0 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf6F6VAN0 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf6F6VAN0 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.26□□□□□ -0.13
Atf6F6VAN0 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf6F6VAN0 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atf6F6VAN0 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atf6F6VAN0 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Atf6F6VAN0 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.26□□□□□ -0.13
Atf6F6VAN0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Atf6F6VAN0 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Atf6F6VAN0 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.26□□□□□ -0.13
Atf6F6VAN0 Gm29741-201ENSMUST00000192667 421 ntBASIC14.26□□□□□ -0.13
Atf6F6VAN0 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf6F6VAN0 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf6F6VAN0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf6F6VAN0 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf6F6VAN0 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf6F6VAN0 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf6F6VAN0 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf6F6VAN0 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf6F6VAN0 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf6F6VAN0 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf6F6VAN0 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf6F6VAN0 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.26□□□□□ -0.13
Atf6F6VAN0 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf6F6VAN0 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf6F6VAN0 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atf6F6VAN0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.25□□□□□ -0.13
Atf6F6VAN0 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf6F6VAN0 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Atf6F6VAN0 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf6F6VAN0 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Atf6F6VAN0 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.25□□□□□ -0.13
Atf6F6VAN0 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf6F6VAN0 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf6F6VAN0 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf6F6VAN0 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.25□□□□□ -0.13
Atf6F6VAN0 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf6F6VAN0 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf6F6VAN0 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.25□□□□□ -0.13
Atf6F6VAN0 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atf6F6VAN0 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms