Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Gm6912-201ENSMUST00000117218 544 ntBASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Gm14057-201ENSMUST00000120631 482 ntBASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Gm10576-201ENSMUST00000191927 825 ntBASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Gm5425-201ENSMUST00000214125 459 ntBASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Gm20445-201ENSMUST00000061905 565 ntBASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4lE9Q2N0 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4lE9Q2N0 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Gm15240-201ENSMUST00000118156 720 ntBASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Gm15321-201ENSMUST00000121290 288 ntBASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Gm21854-201ENSMUST00000179901 471 ntBASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Gm24694-201ENSMUST00000180054 110 ntBASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms