Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd6A3KFM7 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.12□□□□□ -0.63
Chd6A3KFM7 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Gm5621-201ENSMUST00000187303 640 ntBASIC11.12□□□□□ -0.63
Chd6A3KFM7 Gm43916-201ENSMUST00000205062 967 ntBASIC11.12□□□□□ -0.63
Chd6A3KFM7 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.12□□□□□ -0.63
Chd6A3KFM7 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC11.12□□□□□ -0.63
Chd6A3KFM7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd6A3KFM7 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.11□□□□□ -0.63
Chd6A3KFM7 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.11□□□□□ -0.63
Chd6A3KFM7 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Gm45212-201ENSMUST00000205831 3403 ntBASIC11.11□□□□□ -0.63
Chd6A3KFM7 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd6A3KFM7 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.11□□□□□ -0.63
Chd6A3KFM7 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd6A3KFM7 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Gm13385-201ENSMUST00000121089 220 ntBASIC11.1□□□□□ -0.63
Chd6A3KFM7 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Gm24420-201ENSMUST00000176676 59 ntBASIC11.1□□□□□ -0.63
Chd6A3KFM7 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.1□□□□□ -0.63
Chd6A3KFM7 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms