Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cfap99A0A140LIX9 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cfap99A0A140LIX9 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Cfap99A0A140LIX9 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cfap99A0A140LIX9 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Gm17150-201ENSMUST00000165577 381 ntBASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cfap99A0A140LIX9 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cfap99A0A140LIX9 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cfap99A0A140LIX9 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cfap99A0A140LIX9 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cfap99A0A140LIX9 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cfap99A0A140LIX9 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cfap99A0A140LIX9 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Cfap99A0A140LIX9 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.6■□□□□ 0.25
Cfap99A0A140LIX9 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Cfap99A0A140LIX9 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Cfap99A0A140LIX9 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Cfap99A0A140LIX9 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.6■□□□□ 0.25
Cfap99A0A140LIX9 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cfap99A0A140LIX9 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.6■□□□□ 0.25
Cfap99A0A140LIX9 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cfap99A0A140LIX9 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cfap99A0A140LIX9 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cfap99A0A140LIX9 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cfap99A0A140LIX9 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cfap99A0A140LIX9 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cfap99A0A140LIX9 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cfap99A0A140LIX9 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
Cfap99A0A140LIX9 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.6■□□□□ 0.25
Cfap99A0A140LIX9 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Cfap99A0A140LIX9 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap99A0A140LIX9 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap99A0A140LIX9 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap99A0A140LIX9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap99A0A140LIX9 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap99A0A140LIX9 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap99A0A140LIX9 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap99A0A140LIX9 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.59■□□□□ 0.25
Cfap99A0A140LIX9 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.59■□□□□ 0.25
Cfap99A0A140LIX9 Gm5354-201ENSMUST00000182417 973 ntBASIC16.59■□□□□ 0.25
Cfap99A0A140LIX9 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.59■□□□□ 0.25
Cfap99A0A140LIX9 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap99A0A140LIX9 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap99A0A140LIX9 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap99A0A140LIX9 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap99A0A140LIX9 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap99A0A140LIX9 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap99A0A140LIX9 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap99A0A140LIX9 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap99A0A140LIX9 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap99A0A140LIX9 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap99A0A140LIX9 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap99A0A140LIX9 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap99A0A140LIX9 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap99A0A140LIX9 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cfap99A0A140LIX9 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.58■□□□□ 0.25
Cfap99A0A140LIX9 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Cfap99A0A140LIX9 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cfap99A0A140LIX9 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cfap99A0A140LIX9 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cfap99A0A140LIX9 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cfap99A0A140LIX9 Gm10275-202ENSMUST00000168697 495 ntBASIC16.58■□□□□ 0.24
Cfap99A0A140LIX9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.58■□□□□ 0.24
Cfap99A0A140LIX9 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms