Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Igkv8-27A0A0G2JF28 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Igkv8-27A0A0G2JF28 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Igkv8-27A0A0G2JF28 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Igkv8-27A0A0G2JF28 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Igkv8-27A0A0G2JF28 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Igkv8-27A0A0G2JF28 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Igkv8-27A0A0G2JF28 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Igkv8-27A0A0G2JF28 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Igkv8-27A0A0G2JF28 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Igkv8-27A0A0G2JF28 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Igkv8-27A0A0G2JF28 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Igkv8-27A0A0G2JF28 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Igkv8-27A0A0G2JF28 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Igkv8-27A0A0G2JF28 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Igkv8-27A0A0G2JF28 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Igkv8-27A0A0G2JF28 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Igkv8-27A0A0G2JF28 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Igkv8-27A0A0G2JF28 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Igkv8-27A0A0G2JF28 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Igkv8-27A0A0G2JF28 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Gm17435-202ENSMUST00000212699 1998 ntBASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Gm5385-201ENSMUST00000118988 1559 ntBASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Gm10327-201ENSMUST00000105222 1002 ntBASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Gm11185-201ENSMUST00000117732 1007 ntBASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Gm18489-201ENSMUST00000172565 551 ntBASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Gm5069-202ENSMUST00000192714 1011 ntBASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Ighv6-1-201ENSMUST00000193612 343 ntBASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Igkv8-27A0A0G2JF28 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Igkv8-27A0A0G2JF28 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC8.65□□□□□ -1.02
Igkv8-27A0A0G2JF28 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC8.65□□□□□ -1.02
Igkv8-27A0A0G2JF28 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Igkv8-27A0A0G2JF28 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Igkv8-27A0A0G2JF28 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Igkv8-27A0A0G2JF28 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Igkv8-27A0A0G2JF28 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Igkv8-27A0A0G2JF28 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Igkv8-27A0A0G2JF28 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Igkv8-27A0A0G2JF28 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC8.65□□□□□ -1.02
Igkv8-27A0A0G2JF28 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
Igkv8-27A0A0G2JF28 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Igkv8-27A0A0G2JF28 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC8.65□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms