Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.39□□□□□ -0.59
Trav18A0A075B656 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav18A0A075B656 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.38□□□□□ -0.59
Trav18A0A075B656 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Gm13015-201ENSMUST00000118674 204 ntBASIC11.38□□□□□ -0.59
Trav18A0A075B656 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Gm25911-201ENSMUST00000157621 56 ntBASIC11.38□□□□□ -0.59
Trav18A0A075B656 Gm8116-201ENSMUST00000182917 1201 ntBASIC11.38□□□□□ -0.59
Trav18A0A075B656 Gm5264-201ENSMUST00000190584 848 ntBASIC11.38□□□□□ -0.59
Trav18A0A075B656 AA619741-201ENSMUST00000195095 646 ntBASIC11.38□□□□□ -0.59
Trav18A0A075B656 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav18A0A075B656 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.38□□□□□ -0.59
Trav18A0A075B656 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav18A0A075B656 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav18A0A075B656 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.37□□□□□ -0.59
Trav18A0A075B656 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.37□□□□□ -0.59
Trav18A0A075B656 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Gm4995-201ENSMUST00000117247 432 ntBASIC11.37□□□□□ -0.59
Trav18A0A075B656 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Gm18889-201ENSMUST00000174284 929 ntBASIC11.37□□□□□ -0.59
Trav18A0A075B656 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Gm27525-201ENSMUST00000184465 107 ntBASIC11.37□□□□□ -0.59
Trav18A0A075B656 Gm27494-201ENSMUST00000184735 189 ntBASIC11.37□□□□□ -0.59
Trav18A0A075B656 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav18A0A075B656 AW822252-206ENSMUST00000208904 237 ntBASIC11.37□□□□□ -0.59
Trav18A0A075B656 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.37□□□□□ -0.59
Trav18A0A075B656 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.37□□□□□ -0.59
Trav18A0A075B656 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.37□□□□□ -0.59
Trav18A0A075B656 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav18A0A075B656 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav18A0A075B656 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav18A0A075B656 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms