Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Gm5837-201ENSMUST00000191844 1369 ntBASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Gm15358-201ENSMUST00000119249 520 ntBASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Gm6728-201ENSMUST00000178117 1065 ntBASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Gm27742-201ENSMUST00000184667 60 ntBASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 AC093926.2-201ENSMUST00000214468 1228 ntBASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Gm15889-202ENSMUST00000212669 2443 ntBASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav8-1A0A075B641 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Gm4780-202ENSMUST00000215200 2644 ntBASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Olfr129-201ENSMUST00000122318 993 ntBASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Gm27867-201ENSMUST00000184778 125 ntBASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Gm7506-201ENSMUST00000207758 815 ntBASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 AC108846.1-201ENSMUST00000214531 513 ntBASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav8-1A0A075B641 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav8-1A0A075B641 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav8-1A0A075B641 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav8-1A0A075B641 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC9.92□□□□□ -0.82
Trav8-1A0A075B641 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Trav8-1A0A075B641 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav8-1A0A075B641 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Trav8-1A0A075B641 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms