Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim42Q9D2H5 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim42Q9D2H5 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim42Q9D2H5 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim42Q9D2H5 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim42Q9D2H5 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim42Q9D2H5 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim42Q9D2H5 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.93□□□□□ -0.18
Trim42Q9D2H5 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Trim42Q9D2H5 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim42Q9D2H5 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim42Q9D2H5 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim42Q9D2H5 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim42Q9D2H5 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trim42Q9D2H5 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.93□□□□□ -0.18
Trim42Q9D2H5 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim42Q9D2H5 Gm7230-201ENSMUST00000173026 815 ntBASIC13.93□□□□□ -0.18
Trim42Q9D2H5 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trim42Q9D2H5 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.93□□□□□ -0.18
Trim42Q9D2H5 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim42Q9D2H5 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim42Q9D2H5 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim42Q9D2H5 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trim42Q9D2H5 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim42Q9D2H5 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim42Q9D2H5 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim42Q9D2H5 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim42Q9D2H5 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim42Q9D2H5 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim42Q9D2H5 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim42Q9D2H5 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim42Q9D2H5 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim42Q9D2H5 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim42Q9D2H5 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim42Q9D2H5 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Gm10275-202ENSMUST00000168697 495 ntBASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Gm6550-201ENSMUST00000187574 993 ntBASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Gm10275-201ENSMUST00000092620 635 ntBASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim42Q9D2H5 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim42Q9D2H5 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim42Q9D2H5 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.91□□□□□ -0.18
Trim42Q9D2H5 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trim42Q9D2H5 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim42Q9D2H5 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim42Q9D2H5 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.91□□□□□ -0.18
Trim42Q9D2H5 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim42Q9D2H5 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim42Q9D2H5 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim42Q9D2H5 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trim42Q9D2H5 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim42Q9D2H5 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trim42Q9D2H5 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.91□□□□□ -0.18
Trim42Q9D2H5 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim42Q9D2H5 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trim42Q9D2H5 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms