Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc3Q9CW03 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc3Q9CW03 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc3Q9CW03 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc3Q9CW03 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc3Q9CW03 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smc3Q9CW03 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smc3Q9CW03 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc3Q9CW03 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc3Q9CW03 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc3Q9CW03 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc3Q9CW03 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc3Q9CW03 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smc3Q9CW03 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Smc3Q9CW03 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.35■□□□□ 0.21
Smc3Q9CW03 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc3Q9CW03 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc3Q9CW03 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smc3Q9CW03 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc3Q9CW03 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smc3Q9CW03 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.35■□□□□ 0.21
Smc3Q9CW03 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.35■□□□□ 0.21
Smc3Q9CW03 Gm25911-201ENSMUST00000157621 56 ntBASIC16.35■□□□□ 0.21
Smc3Q9CW03 Gm18889-201ENSMUST00000174284 929 ntBASIC16.35■□□□□ 0.21
Smc3Q9CW03 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.35■□□□□ 0.21
Smc3Q9CW03 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smc3Q9CW03 Gm27525-201ENSMUST00000184465 107 ntBASIC16.35■□□□□ 0.21
Smc3Q9CW03 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Smc3Q9CW03 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.35■□□□□ 0.21
Smc3Q9CW03 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smc3Q9CW03 Gm18049-201ENSMUST00000208909 581 ntBASIC16.35■□□□□ 0.21
Smc3Q9CW03 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc3Q9CW03 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc3Q9CW03 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smc3Q9CW03 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc3Q9CW03 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc3Q9CW03 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Smc3Q9CW03 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smc3Q9CW03 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC16.35■□□□□ 0.21
Smc3Q9CW03 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smc3Q9CW03 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smc3Q9CW03 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smc3Q9CW03 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smc3Q9CW03 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smc3Q9CW03 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smc3Q9CW03 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Smc3Q9CW03 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.34■□□□□ 0.21
Smc3Q9CW03 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.34■□□□□ 0.21
Smc3Q9CW03 Gm13365-201ENSMUST00000121188 973 ntBASIC16.34■□□□□ 0.21
Smc3Q9CW03 Gm27631-201ENSMUST00000184163 466 ntBASIC16.34■□□□□ 0.21
Smc3Q9CW03 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.34■□□□□ 0.21
Smc3Q9CW03 Gm45453-201ENSMUST00000211758 853 ntBASIC16.34■□□□□ 0.21
Smc3Q9CW03 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Smc3Q9CW03 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Smc3Q9CW03 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smc3Q9CW03 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC16.34■□□□□ 0.21
Smc3Q9CW03 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Smc3Q9CW03 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smc3Q9CW03 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smc3Q9CW03 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Smc3Q9CW03 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smc3Q9CW03 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Smc3Q9CW03 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smc3Q9CW03 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.33■□□□□ 0.21
Smc3Q9CW03 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smc3Q9CW03 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Smc3Q9CW03 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC16.33■□□□□ 0.21
Smc3Q9CW03 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smc3Q9CW03 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smc3Q9CW03 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smc3Q9CW03 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Smc3Q9CW03 Gm6198-201ENSMUST00000191337 2929 ntBASIC16.33■□□□□ 0.21
Smc3Q9CW03 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smc3Q9CW03 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smc3Q9CW03 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smc3Q9CW03 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Smc3Q9CW03 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smc3Q9CW03 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smc3Q9CW03 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc3Q9CW03 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc3Q9CW03 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.33■□□□□ 0.2
Smc3Q9CW03 Mir1895-201ENSMUST00000122615 79 ntBASIC16.33■□□□□ 0.2
Smc3Q9CW03 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.33■□□□□ 0.2
Smc3Q9CW03 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.33■□□□□ 0.2
Smc3Q9CW03 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Smc3Q9CW03 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Smc3Q9CW03 Gm8000-201ENSMUST00000188378 592 ntBASIC16.33■□□□□ 0.2
Smc3Q9CW03 AW822252-206ENSMUST00000208904 237 ntBASIC16.33■□□□□ 0.2
Smc3Q9CW03 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smc3Q9CW03 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc3Q9CW03 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc3Q9CW03 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc3Q9CW03 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC16.33■□□□□ 0.2
Smc3Q9CW03 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc3Q9CW03 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Smc3Q9CW03 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc3Q9CW03 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc3Q9CW03 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Smc3Q9CW03 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.33■□□□□ 0.2
Smc3Q9CW03 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms