Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkd1Q99MH6 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Gm2810-201ENSMUST00000118681 990 ntBASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.11□□□□□ -0.31
Nkd1Q99MH6 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkd1Q99MH6 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkd1Q99MH6 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkd1Q99MH6 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkd1Q99MH6 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkd1Q99MH6 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Nkd1Q99MH6 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Nkd1Q99MH6 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nkd1Q99MH6 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nkd1Q99MH6 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkd1Q99MH6 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nkd1Q99MH6 Gm15467-201ENSMUST00000120582 445 ntBASIC13.1□□□□□ -0.31
Nkd1Q99MH6 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nkd1Q99MH6 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.1□□□□□ -0.31
Nkd1Q99MH6 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.1□□□□□ -0.31
Nkd1Q99MH6 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nkd1Q99MH6 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.1□□□□□ -0.31
Nkd1Q99MH6 AC153937.1-201ENSMUST00000218734 412 ntBASIC13.1□□□□□ -0.31
Nkd1Q99MH6 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.1□□□□□ -0.31
Nkd1Q99MH6 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nkd1Q99MH6 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Nkd1Q99MH6 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkd1Q99MH6 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkd1Q99MH6 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkd1Q99MH6 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkd1Q99MH6 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkd1Q99MH6 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.1□□□□□ -0.31
Nkd1Q99MH6 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.1□□□□□ -0.31
Nkd1Q99MH6 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nkd1Q99MH6 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nkd1Q99MH6 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkd1Q99MH6 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkd1Q99MH6 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nkd1Q99MH6 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkd1Q99MH6 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkd1Q99MH6 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkd1Q99MH6 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.09□□□□□ -0.31
Nkd1Q99MH6 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nkd1Q99MH6 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nkd1Q99MH6 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkd1Q99MH6 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nkd1Q99MH6 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nkd1Q99MH6 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.09□□□□□ -0.31
Nkd1Q99MH6 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nkd1Q99MH6 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nkd1Q99MH6 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkd1Q99MH6 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms