Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Gm28926-201ENSMUST00000191063 680 ntBASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Gm37676-201ENSMUST00000195496 507 ntBASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 AC134254.4-201ENSMUST00000223086 370 ntBASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 AC154515.3-201ENSMUST00000225081 1159 ntBASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 AC164597.2-201ENSMUST00000226738 603 ntBASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 AC147628.1-201ENSMUST00000228193 688 ntBASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Gm18300-201ENSMUST00000192792 1406 ntBASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Gm45885-202ENSMUST00000211520 1383 ntBASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Mup-ps15-201ENSMUST00000121741 539 ntBASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Mir7684-201ENSMUST00000183858 60 ntBASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Gm28064-201ENSMUST00000185639 858 ntBASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Gm2087-201ENSMUST00000188217 366 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Gm7238-201ENSMUST00000206467 973 ntBASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Ifnb1-201ENSMUST00000055671 750 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Mir125a-201ENSMUST00000083545 68 ntBASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb20Q91XZ9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Psmd10-201ENSMUST00000033805 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms