Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.31
Ndc1Q8VCB1 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ndc1Q8VCB1 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Gm6745-201ENSMUST00000199216 526 ntBASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.14□□□□□ -0.31
Ndc1Q8VCB1 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Gm21470-201ENSMUST00000187680 696 ntBASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Gm28631-201ENSMUST00000190740 334 ntBASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Gm37917-201ENSMUST00000194711 392 ntBASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Gm8515-201ENSMUST00000194852 576 ntBASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ndc1Q8VCB1 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ndc1Q8VCB1 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms