Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip4Q8CI96 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clip4Q8CI96 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip4Q8CI96 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip4Q8CI96 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip4Q8CI96 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Clip4Q8CI96 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Clip4Q8CI96 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.04□□□□□ -0.16
Clip4Q8CI96 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip4Q8CI96 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip4Q8CI96 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.04□□□□□ -0.16
Clip4Q8CI96 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip4Q8CI96 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip4Q8CI96 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip4Q8CI96 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip4Q8CI96 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.04□□□□□ -0.16
Clip4Q8CI96 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.04□□□□□ -0.16
Clip4Q8CI96 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip4Q8CI96 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clip4Q8CI96 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.04□□□□□ -0.16
Clip4Q8CI96 Gm27618-201ENSMUST00000183671 60 ntBASIC14.04□□□□□ -0.16
Clip4Q8CI96 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.04□□□□□ -0.16
Clip4Q8CI96 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.04□□□□□ -0.16
Clip4Q8CI96 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.04□□□□□ -0.16
Clip4Q8CI96 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip4Q8CI96 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip4Q8CI96 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip4Q8CI96 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip4Q8CI96 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.04□□□□□ -0.16
Clip4Q8CI96 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip4Q8CI96 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip4Q8CI96 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip4Q8CI96 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clip4Q8CI96 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clip4Q8CI96 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip4Q8CI96 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip4Q8CI96 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clip4Q8CI96 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clip4Q8CI96 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Clip4Q8CI96 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip4Q8CI96 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.03□□□□□ -0.16
Clip4Q8CI96 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Gm28630-201ENSMUST00000187806 498 ntBASIC14.03□□□□□ -0.16
Clip4Q8CI96 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clip4Q8CI96 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.03□□□□□ -0.16
Clip4Q8CI96 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Clip4Q8CI96 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Clip4Q8CI96 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clip4Q8CI96 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
Clip4Q8CI96 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clip4Q8CI96 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Clip4Q8CI96 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.02□□□□□ -0.16
Clip4Q8CI96 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clip4Q8CI96 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Clip4Q8CI96 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.02□□□□□ -0.16
Clip4Q8CI96 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clip4Q8CI96 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clip4Q8CI96 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.02□□□□□ -0.16
Clip4Q8CI96 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clip4Q8CI96 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clip4Q8CI96 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.02□□□□□ -0.17
Clip4Q8CI96 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clip4Q8CI96 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clip4Q8CI96 Gm27622-201ENSMUST00000183779 60 ntBASIC14.02□□□□□ -0.17
Clip4Q8CI96 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clip4Q8CI96 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clip4Q8CI96 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.02□□□□□ -0.17
Clip4Q8CI96 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clip4Q8CI96 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clip4Q8CI96 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clip4Q8CI96 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clip4Q8CI96 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms