Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Shisa4Q8CA71 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shisa4Q8CA71 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shisa4Q8CA71 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shisa4Q8CA71 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shisa4Q8CA71 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.08■□□□□ 0.16
Shisa4Q8CA71 Gm11524-201ENSMUST00000119349 807 ntBASIC16.08■□□□□ 0.16
Shisa4Q8CA71 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Shisa4Q8CA71 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.08■□□□□ 0.16
Shisa4Q8CA71 Mir7654-201ENSMUST00000185082 70 ntBASIC16.08■□□□□ 0.16
Shisa4Q8CA71 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.08■□□□□ 0.16
Shisa4Q8CA71 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Shisa4Q8CA71 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shisa4Q8CA71 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.08■□□□□ 0.16
Shisa4Q8CA71 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shisa4Q8CA71 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shisa4Q8CA71 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shisa4Q8CA71 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shisa4Q8CA71 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shisa4Q8CA71 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Shisa4Q8CA71 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Matn2-206ENSMUST00000228570 2798 ntBASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa4Q8CA71 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa4Q8CA71 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa4Q8CA71 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa4Q8CA71 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa4Q8CA71 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa4Q8CA71 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa4Q8CA71 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa4Q8CA71 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa4Q8CA71 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa4Q8CA71 Gm15824-201ENSMUST00000119516 955 ntBASIC16.06■□□□□ 0.16
Shisa4Q8CA71 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC16.06■□□□□ 0.16
Shisa4Q8CA71 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa4Q8CA71 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa4Q8CA71 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Shisa4Q8CA71 Gm15823-201ENSMUST00000064305 670 ntBASIC16.06■□□□□ 0.16
Shisa4Q8CA71 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa4Q8CA71 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.06■□□□□ 0.16
Shisa4Q8CA71 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa4Q8CA71 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa4Q8CA71 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa4Q8CA71 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa4Q8CA71 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa4Q8CA71 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
Shisa4Q8CA71 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa4Q8CA71 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Gm12403-201ENSMUST00000121384 959 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms