Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sh3rf2Q8BZT2 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.08□□□□□ -0.15
Sh3rf2Q8BZT2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 Gm15824-201ENSMUST00000119516 955 ntBASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 Gm12485-201ENSMUST00000119641 291 ntBASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 Gm15429-201ENSMUST00000151268 798 ntBASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 Gm6266-201ENSMUST00000203844 806 ntBASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh3rf2Q8BZT2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh3rf2Q8BZT2 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Gm6244-201ENSMUST00000178732 841 ntBASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Gm2495-201ENSMUST00000191160 466 ntBASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms