Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm27772-201ENSMUST00000184900 187 ntBASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.21□□□□□ -0.3
Cdk5rap1Q8BTW8 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdk5rap1Q8BTW8 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdk5rap1Q8BTW8 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdk5rap1Q8BTW8 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Cdk5rap1Q8BTW8 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdk5rap1Q8BTW8 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cdk5rap1Q8BTW8 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdk5rap1Q8BTW8 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm11478-201ENSMUST00000117851 599 ntBASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm11918-201ENSMUST00000121660 179 ntBASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm45384-201ENSMUST00000210451 277 ntBASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap1Q8BTW8 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap1Q8BTW8 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms