Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf7Q8BTV2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cpsf7Q8BTV2 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf7Q8BTV2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf7Q8BTV2 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf7Q8BTV2 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf7Q8BTV2 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.95□□□□□ -0.18
Cpsf7Q8BTV2 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf7Q8BTV2 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Cpsf7Q8BTV2 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf7Q8BTV2 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cpsf7Q8BTV2 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cpsf7Q8BTV2 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf7Q8BTV2 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.94□□□□□ -0.18
Cpsf7Q8BTV2 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf7Q8BTV2 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Cpsf7Q8BTV2 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf7Q8BTV2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf7Q8BTV2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf7Q8BTV2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf7Q8BTV2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf7Q8BTV2 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.94□□□□□ -0.18
Cpsf7Q8BTV2 Mir3113-201ENSMUST00000175478 76 ntBASIC13.94□□□□□ -0.18
Cpsf7Q8BTV2 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf7Q8BTV2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf7Q8BTV2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cpsf7Q8BTV2 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cpsf7Q8BTV2 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.94□□□□□ -0.18
Cpsf7Q8BTV2 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf7Q8BTV2 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cpsf7Q8BTV2 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf7Q8BTV2 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf7Q8BTV2 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf7Q8BTV2 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf7Q8BTV2 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf7Q8BTV2 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Cpsf7Q8BTV2 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.93□□□□□ -0.18
Cpsf7Q8BTV2 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.93□□□□□ -0.18
Cpsf7Q8BTV2 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Cpsf7Q8BTV2 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf7Q8BTV2 Gm4995-201ENSMUST00000117247 432 ntBASIC13.93□□□□□ -0.18
Cpsf7Q8BTV2 Gm15957-201ENSMUST00000118893 974 ntBASIC13.93□□□□□ -0.18
Cpsf7Q8BTV2 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.93□□□□□ -0.18
Cpsf7Q8BTV2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Cpsf7Q8BTV2 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.93□□□□□ -0.18
Cpsf7Q8BTV2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Cpsf7Q8BTV2 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.93□□□□□ -0.18
Cpsf7Q8BTV2 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf7Q8BTV2 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf7Q8BTV2 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.93□□□□□ -0.18
Cpsf7Q8BTV2 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf7Q8BTV2 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf7Q8BTV2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf7Q8BTV2 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Mir8117-201ENSMUST00000184773 107 ntBASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Cpsf7Q8BTV2 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf7Q8BTV2 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf7Q8BTV2 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf7Q8BTV2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms